Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2406 ATGCAAAATTGCAGGCTGCCCGACTCTTGCTTTCTCTCTCACTCCTCCATTAGCTGCACCCACAATGCCATCAATCTGAACCAATCTTCCACCATTGTCTCCTTTTACTCATTCCTCACTCTGCTCGGCGTTGCTCGCACATTCTCAGCAATGCTGCCTCACAAGCTCTCTCTCTTGCTTCCCTTCTTCCTCATTTTGCTTCCTCTAGCCACACCAGATCCGGCTTCTGAGCGAGCTGCTCTTCTTGCTCTCCGTTCTTCAGTCGGTGGCCGAACCCTTCTCTGGAACATCACTGAACCGGATCACTGCAAGTGGGCCGGCGTCCAATGCGACCGTGGCCAGGTAATCGAGCTTCATCTTCCCGGTGTTGGGCTTTCGGGCAAGTTGCCTAACGGCATTTTTGGTAACCTCACTCATCTCCTGACTCTCAGTCTGCGTTTCAACGCCTTGACTGGTAGTCTTCCTTCAGATCTCGCTTCTTGTGGCCATCTTCGGAATCTTTACTTGCAGCGAAACTTGCTCTCTGGAGAAATCCCTGAATTCTTGTTCTCTTTACCCGATATGGTCCGCCTTAATTTAGCGCACAACAATTTTTCCGGTGCGATTCCACTGGATTTCAACAAGTTGGTAAGGCTGAGGACTCTGTATCTCGAGAATAATCAGCTTTCAGGTCCCATTCCCGGGTTGAAACTGGAAAATCTCGAGCAGTTCAATGTGTCGAACAATTTGTTAAACGGCTCGGTACCGGTAAAGCTACAGACATTTTCAGAAGATTCATTTCTAGGCAATTCTCTTTGTGGGAAGCCCCTCAAGCTTTGCCCAGGAGAAGGAACCGCAATATCTCCGTCAGGCGAGATTGATACCAACAATAACAACGGAGGGAAGAAGAAGAAATTGTCTGGTGGGGCCATTGCCGGAATAGTCATTGGATCTGTGGTGCTTCTCCTGTTGATTGTGTTTGCTTTGATTCTCCTTTGCCGAAAGAAGAGTAGCGAGAAGTCGAGGTCCGTCGACATTACAACTATGAAGCATCCGGAAACTGAAATTCCAGGCGACAAACCCGTTCCAGATGTGGAGAATAATGGCCACAGTAATGGATATTCAGTAGCTGCAGTGGCTGCAGCAGCCATGACAGGAATCGGCAGAACAGAATCAAACAACAATGAAGGTGCGAAGAAGTTGTCATTCTTTGGTAATGCACCGAAGGTGTTTGATCTGGAAGATTTGCTTAGAGCTTCGGCGGAGGTTTTGGGTAAAGGAACGTTTGGAACAGCGTATAAGGCGGTTCTGGAGTCTGGTCCGGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACAATTTCTGAGAAGGAATTCAAGGAGAAGATTGAATTGGTGGGAGCAATGGATAATGAGAATTTGGTCCCTCTCAGAGCTTATTATTTCAGCAGGGATGAAAAACTTCTTGTCTATGATTACATGCCAACCGGAAGCTTATCTGCACTTTTGCACGGAAACAAAGGGGCGGGCAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCACTAGGGGCTGCTAGGGGCATCGAGTACCTACATTCACAAGGACCTACTGTTTCCCATGGAAACATAAAATCATCCAACATCCTCCTCACCAAATCCTATGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGTCCCTCCTCCACTCCCAATCGGGTTGCCGGATACCGTGCGCCAGAAGTTACTGATCCTCGCAAAGTTTCTCAGAAGGCAGATGTCTACGGCTTTGGAGTATTGCTTTTGGAACTTCTGACTGGAAAGGCTCCCACACATTCCCTCTTAAATGAGGAAGGAGTAGACCTCCCAAGATGGGTTCAATCTGTTGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTAAGGTATCAGAATGTTGAGGAGGAGATGGTTCAATTATTGCAGCTTGCTGTAGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGTCTGAGGTGAGACAACGCATAGAAGAGCTATGTCGCTCAAGTTTGAAAGAGGATCAAGACCAAATTCAGCAGCCTGATCTGATCAATATGATGTAG 2106 0.4744 MQNCRLPDSCFLSHSSISCTHNAINLNQSSTIVSFYSFLTLLGVARTFSAMLPHKLSLLLPFFLILLPLATPDPASERAALLALRSSVGGRTLLWNITEPDHCKWAGVQCDRGQVIELHLPGVGLSGKLPNGIFGNLTHLLTLSLRFNALTGSLPSDLASCGHLRNLYLQRNLLSGEIPEFLFSLPDMVRLNLAHNNFSGAIPLDFNKLVRLRTLYLENNQLSGPIPGLKLENLEQFNVSNNLLNGSVPVKLQTFSEDSFLGNSLCGKPLKLCPGEGTAISPSGEIDTNNNNGGKKKKLSGGAIAGIVIGSVVLLLLIVFALILLCRKKSSEKSRSVDITTMKHPETEIPGDKPVPDVENNGHSNGYSVAAVAAAAMTGIGRTESNNNEGAKKLSFFGNAPKVFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIELVGAMDNENLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPTVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYGFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVRQRIEELCRSSLKEDQDQIQQPDLINMM 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2406 701 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Alju01g2406 701 PANTHER OS05G0588300 PROTEIN 59 684 - -
Alju01g2406 701 Gene3D Phosphorylase Kinase; domain 1 377 485 - -
Alju01g2406 701 SUPERFAMILY Protein kinase-like (PK-like) 415 677 IPR011009 -
Alju01g2406 701 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Alju01g2406 701 FunFam Probable inactive receptor kinase RLK902 74 230 - -
Alju01g2406 701 Gene3D Ribonuclease Inhibitor 76 184 IPR032675 -
Alju01g2406 701 FunFam Probable inactive receptor kinase At1g48480 486 689 - -
Alju01g2406 701 SUPERFAMILY L domain-like 93 252 - -
Alju01g2406 701 Pfam Leucine rich repeat N-terminal domain 75 111 IPR013210 -
Alju01g2406 701 CDD STKc_IRAK 417 680 - -
Alju01g2406 701 ProSiteProfiles Protein kinase domain profile. 411 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2406 701 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Alju01g2406 701 FunFam pollen receptor-like kinase 1 381 485 - -
Alju01g2406 701 Gene3D Transferase(Phosphotransferase) domain 1 486 699 - -
Alju01g2406 701 Gene3D Ribonuclease Inhibitor 188 273 IPR032675 -
Alju01g2406 701 Pfam Protein kinase domain 414 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2406 Alju-ChrAlju01 22049052 22051709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2406 71 696 Receptor kinase-like Gene Family AT1G48480 65.517 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju01g2406 Pkinase 2.3e-37 CL0016