Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2404 ATGGTCTTCAAAGGTAGGTTCTTCAACTTCAAGAAATCCGACTCTTCTAGCCCCGATGGATCACCCAGTAGTCCCCGATCATTTGGCTCCAATTCCCCCAGCAGATCCGACAAGAAGAAGGCCAAATCAACTGCTAAGGATTCACAGATCGCTAACACTGCGAGTGCCACTGGGTTCGGGGATGCTTGCCGCCCTAAGCAAGTGAAGGATGGTACTAAGAAGAAGGATGCCAAAGGAAACGAGAGTCAGGCTCAACAAGAGTCCCGTTGGATACCGTCCAAGCCCAGCTCCGGCGGGGAATTGGGTTCCAGTTTGTCACCGAGTTCTGGGTTGAAGCCGAAGATGGTCGCTGCTGCGGCGGCGGGTGGTCCTGCTAGCGGGAAGGAATCGCCCTCGTCTTCGGTTTCGCCAATTTTAGCATCTTCCCTTGGATTGAATAGGATAAAGACGAGATCAGGACCACTACCACAGGAAAGCTTCTTCGGCTTTAGGAATGATAAAGGGTCGACACTTGGTGTGAGTAATCTCTCGAAGCCTGGCAGTGATGATGGAAAACTGAAGGAGCCTGTGAATTACCGTAAAGTGGCTTTTCAAGAGAGCTCTGGAAGCGGAAACTGGGTTGATAATGGCAACAATTCAGATAGTGTGTCAACTGGGAGTGCTCCGTCGAGGGACCAGAGCCCCAATGTATTGCCACGGTCGCGGCTACAGAACGCGGAATCATCAGCCGAATCAGGGAGACAAGAATCGACACGGTTTCAGTCTGAAGGCTTACAAAGTGCAGATGTTTGCACTCCAGAGACAGCATATGATTATGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCATTATTACGTGTTACAAGTGCACCAAGAAAGAGGTTTCCTAATGACATTAAAAGTTATTCTCATGAGCTGAATTCCAAAGGCGTCGTTCGTCCTTTCCCATTTTGGAAGGCTCGAAGATTAAATAATGTGGAGGAGATCTTGGTTGTAATTCGGGCAAAATTTGATAAAGAAAAGGAAGAAGTGAATTCTGAGTTGGCTATTTTTGCAGCAGATCTGGTTGGAATTCTTGACAAAAATGCAGATACTCATCCTGAGTGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCTAGGAGCTGTGCTATGACTTCACCTGGGGAGTTTTGGCTTCAGTGTGAAGGAATTGTTCAGGAATTGGATGATAAGCGTCAAGAACTTCCCCCTGGAATGCTAAAGCGGCTTCATACACGAATGCTCTTCATTCTCACCAGGTGTACAAGGTTATTGCAATTCCACAAGGAAAGTGGTTTGGCAGAGGATGAACATGTTTTTAATCTCCACCAATCTAGAGTCTTGCACTCTGCTGAAAAAAGGATTCCTCCAGGTTTGGGAAGGGATGAAAAAAGCTTGAGCACTACAAAGGCCTCAAAGGTGTCAAAAGCGTCTGCTAAAAAGTCTTATAGTCAGGAGCAGCATAGCTTCGAATTGAAGAAAGATGCTATGCAGCCTGAAAAACTTCCTCTCCGTGCTGGTGACGCTTCAAAGCAAGATTCTTTTTCAGGCATGGATCGGATGGGTTCTTGGAAGAAATTCCTATCTCCAGCAAGTAAAAGCCCAAAAGAAGCAGCTCAGATGAAGGACCAGAATCTTGGAAAGGTTGAACCTTCAAAGCTATCAATTAATAAGAGATCAAATTCTGATGTGGATCTGTCAGCCCCAAAGCCATCTGAGCTTATTAAGGATTCCCATGAACATGTTTCCAAACATCAACACAAAGTTTCTTGGGGCTATTGGGGTGAGCATCAGAGTATTGTTGAGGAGAACTCGATAATTTGCCGTATATGTGAGGAGGAAGTTGCTACTTCACATGTTGAAGAACATTCAAGGATTTGTGCAATTGCTGATAGATGTGATCAGAAGGGTTTGAGTGTTAATGAGCGCCTAGTCAGAATTGCTGAAACTTTAGAAAAGATGATGGAATCATGTATGCAGAAGGATATCCAGCAAATAGTGGAAAGTCCTGATGTGGGAAAGGTGTCAAATTCAAGTATGACTGAAGAATCTGATGTTCTCTCTCCAAAACTCAGTGATTGGTCTCGAAGAGGCTCAGAGGATATGTTAGACTGTTTCCCTGAAGCTGATAATTCTGCTTTTATGGATGACCTGAAGGGGCTACCTCCGATATCATGTAAAACTCGCTTTGGTCCCAAGTCTGATCAAGGCATGGCAACTTCTTCTGCAGGGAGCATGACTCCCAGGTCTCCCTTGATGACGCCAAGGACAAGTCAGATTGATTTACTCTTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATTTTCCACAGATGAATGAACTTGCTGATATAGCACGGTGTGTAGCAAATGCTCCTCTGGATGATGATCGCTCGACGTCATATCTATTATCTTGTCTTGATGATTTGCAAGTTGTTGTAGACCGAAGAAAATTTGATGCACTCACAGTGGAGACCTTTGGAGCACGCATTGAGAAGTTGATACGGGAAAAGTATTTGCAGCTTACTGAGATGGTGGAGGATGAAAAGATAGACATAACGAGCACTGTTATTGATGAAGATGCTCCCTTGGATGATGACGTGATTCGTAGCTTGAGAACAAGTCCTATCCATTCTTCCAAAGACCGTACTACCATTGATGATTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAATAACTGGGGATCTTTTTGCAATAAAGGTTCTTAAGAAGGCAGATATGATCCGTAAGAATGCCGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAACCCTTTTGTGGTTCGTTTCTTCTATTCATTTACATGTAGTGAGAACTTGTATCTTGTCATGGAATATCTTAATGGAGGTGACCTCTATTCACTATTAAGGAATTTAGGCTGCCTGGATGAGGAAGTTGCTCGTGTATATATAGCTGAAGTGGTGCTTGCGTTGGAATATTTGCATTCACTGAGGGTGGTTCATCGTGACTTGAAGCCAGACAATTTGTTGATTGCGCATGATGGTCATATTAAGTTGACGGATTTTGGGCTTTCAAAAGTAGGTCTAATCAACAGCACTGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGTGAGGATGAACCTCAGTTATCTACATCTGAGCATCAAAGTGAAAGAAGGAAGAAACGTTCTGCTGTGGGTACACCTGATTACTTAGCACCAGAGATACTCTTGGGAACTGGGCATGGGTATACTGCAGATTGGTGGTCTGTTGGCGTTATTTTATTTGAATTGCTTGTTGGCATTCCACCTTTCAATGCAGAGCATCCTCAGATGATATTTGATAATATCCTTAATCGTAATATACCATGGCCCCGGGTACCGGAAGAAATGAGTCCTGAAGCACGAGATCTTATTGATCGGTTACTGACTGAAGATCCTAATCAGAGACTTGGAGCCAGGGGAGCATCGGAGGTGAAGCAGCATATTTTCTTCAAGGATATAAACTGGGATACTCTTGCCAGGCAGAAGGCTGCATTTGTGCCTTCTTCTGAGAGTGCTCTGGACACAAGTTATTTCACAAGCCGGTATTCATGGAATGCATCCGATGGCCTCGTGTATCATCCAGCTAGTGACATTGAGGAATATAGTGATGCTGATAGCTTAAGTGGCAGTAGTAGTTGCTTGAGCAATCGTCAAGATGAAGTGGGAGATGAATGTGGTGGTCTTGCAGAGTTTGAGCCCGGTTCCTCTGCCGAGTACTCCTTTAGTAATTTTTCCTTCAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTCACCAAGGGATTGAAAGATGACCCACCTCCAAACTCTAGTGCATAA 3936 0.4431 MVFKGRFFNFKKSDSSSPDGSPSSPRSFGSNSPSRSDKKKAKSTAKDSQIANTASATGFGDACRPKQVKDGTKKKDAKGNESQAQQESRWIPSKPSSGGELGSSLSPSSGLKPKMVAAAAAGGPASGKESPSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRNDKGSTLGVSNLSKPGSDDGKLKEPVNYRKVAFQESSGSGNWVDNGNNSDSVSTGSAPSRDQSPNVLPRSRLQNAESSAESGRQESTRFQSEGLQSADVCTPETAYDYENPKESESPRFQALLRVTSAPRKRFPNDIKSYSHELNSKGVVRPFPFWKARRLNNVEEILVVIRAKFDKEKEEVNSELAIFAADLVGILDKNADTHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQELDDKRQELPPGMLKRLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLHQSRVLHSAEKRIPPGLGRDEKSLSTTKASKVSKASAKKSYSQEQHSFELKKDAMQPEKLPLRAGDASKQDSFSGMDRMGSWKKFLSPASKSPKEAAQMKDQNLGKVEPSKLSINKRSNSDVDLSAPKPSELIKDSHEHVSKHQHKVSWGYWGEHQSIVEENSIICRICEEEVATSHVEEHSRICAIADRCDQKGLSVNERLVRIAETLEKMMESCMQKDIQQIVESPDVGKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKGLPPISCKTRFGPKSDQGMATSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDFPQMNELADIARCVANAPLDDDRSTSYLLSCLDDLQVVVDRRKFDALTVETFGARIEKLIREKYLQLTEMVEDEKIDITSTVIDEDAPLDDDVIRSLRTSPIHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRITGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSTSEHQSERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQMIFDNILNRNIPWPRVPEEMSPEARDLIDRLLTEDPNQRLGARGASEVKQHIFFKDINWDTLARQKAAFVPSSESALDTSYFTSRYSWNASDGLVYHPASDIEEYSDADSLSGSSSCLSNRQDEVGDECGGLAEFEPGSSAEYSFSNFSFKNLSQLASINYDLLTKGLKDDPPPNSSA 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2404 1311 MobiDBLite consensus disorder prediction 10 32 - -
Alju01g2404 1311 Pfam Protein kinase domain 898 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2404 1311 MobiDBLite consensus disorder prediction 738 762 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 1073 1088 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 681 702 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 681 697 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 66 82 - -
Alju01g2404 1311 PANTHER SERINE/THREONINE-PROTEIN KINASE 554 1282 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 127 148 - -
Alju01g2404 1311 SUPERFAMILY Protein kinase-like (PK-like) 895 1233 IPR011009 -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 462 577 - -
Alju01g2404 1311 ProSiteProfiles Protein kinase domain profile. 898 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2404 1311 MobiDBLite consensus disorder prediction 559 576 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 743 762 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 1 260 - -
Alju01g2404 1311 CDD STKc_MAST_like 904 1192 - -
Alju01g2404 1311 FunFam probable serine/threonine protein kinase IREH1 896 985 - -
Alju01g2404 1311 Gene3D Phosphorylase Kinase; domain 1 896 1216 - -
Alju01g2404 1311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1017 1029 IPR008271 GO:0004672|GO:0006468
Alju01g2404 1311 MobiDBLite consensus disorder prediction 196 260 - -
Alju01g2404 1311 Gene3D Transferase(Phosphotransferase) domain 1 982 1205 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 83 110 - -
Alju01g2404 1311 SMART serkin_6 898 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2404 1311 MobiDBLite consensus disorder prediction 479 494 - -
Alju01g2404 1311 ProSiteProfiles AGC-kinase C-terminal domain profile. 1188 1293 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju01g2404 1311 MobiDBLite consensus disorder prediction 495 510 - -
Alju01g2404 1311 MobiDBLite consensus disorder prediction 1059 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2404 Alju-ChrAlju01 22023138 22042124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2404 1 1305 AGC Kinase Gene Family AT3G17850 66.214 0.0 1646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Alju01g2404 Pkinase 7e-65 CL0016