Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2402 ATGGAACGCGATTTTCTTGGTTTGAGTTCCAAGATCAGTTCGGCGACTAAGAAAGAGGATGCTACTGATAAAGCAAACGGTCCAATGAAAGGTTCAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATGGTTGTCCTTTAAGACTTCTCCGGAAGATACGACAAGAAAGATGGCAGCATCAGCTGATGCTTTTGACTCTAACCAGAAACCATTCATGGGTGTGAACCAGAAGAGCTCGAGCATGGGAAAGCTAGTAGGAAATGAACGGGAAATGACAGTTTACCCTATGCAACAAGTTGATACACTTTCAGGCTACCCTCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATCAAATCAGAGGAGTACTGTTCTCCAATCTACTGTAAGTACCAATGTTCAGAACATGGTCAATCCTGCCATACAACCACACCCTCAAGGAGGAGTCCCTCTTATTGCCCCTGTACCTGTTCTTCCATCAAACGGTTCCGTTGTTGGCACCACTGACTTAAGGAACTCGTCGGAACCCTCTGTCCAACCTTCTCAGCTGACCATTTTCTATGCTGGTTCAGTGTGTGTTTATGAAGACATATCACCTGAGAAGGCCCAGGCTATTATGTTATTGGCTGGAAATGGGAATGCTCAAAATCAAAACAAGGCAGTTTCAACAGATCCAGTGCAGGCACCAATCTCCAAGCCAACTAAAGATGATGGGTTTATTGTAAGCCAGTCCTACCATTCGCCTTTACCTAGTTCGATTCCCATGACCTTCCATGTTAGTTCTCAGCCTGTAGGAGGATCTCCTAGCGCCAATGAACCTGCAATTGTGAGACCAGTAGCATCTTCTGCTGCCCCAAGTAGCCACTTGGAGCCTCCTAGTGTAGCTGGCTCTTCAAAATCTGCAGCCACAAAAATTGGTTCTCCTGTGGACTTGCCTCAGGCACGTAAAGCATCCTTGGCTCGGTTCTTAGAGAAGCGTAAGGAAAGGGTGACAAGCACATCACCATACTATGTGAACAAGAAATCACCAGAATGTGGCAATCCAGGAACAGATAGTATTAGTTTCTCCATCACTTCCACTGGTTCCTGTCCCCTACCTGCCATGAACTAA 1125 0.4587 MERDFLGLSSKISSATKKEDATDKANGPMKGSGMQWSFSNKVSAVPQWLSFKTSPEDTTRKMAASADAFDSNQKPFMGVNQKSSSMGKLVGNEREMTVYPMQQVDTLSGYPQEARTFSVSNQSNQRSTVLQSTVSTNVQNMVNPAIQPHPQGGVPLIAPVPVLPSNGSVVGTTDLRNSSEPSVQPSQLTIFYAGSVCVYEDISPEKAQAIMLLAGNGNAQNQNKAVSTDPVQAPISKPTKDDGFIVSQSYHSPLPSSIPMTFHVSSQPVGGSPSANEPAIVRPVASSAAPSSHLEPPSVAGSSKSAATKIGSPVDLPQARKASLARFLEKRKERVTSTSPYYVNKKSPECGNPGTDSISFSITSTGSCPLPAMN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2402 374 MobiDBLite consensus disorder prediction 291 309 - -
Alju01g2402 374 MobiDBLite consensus disorder prediction 220 250 - -
Alju01g2402 374 MobiDBLite consensus disorder prediction 220 234 - -
Alju01g2402 374 MobiDBLite consensus disorder prediction 284 314 - -
Alju01g2402 374 Pfam Jas motif 317 342 IPR018467 -
Alju01g2402 374 MobiDBLite consensus disorder prediction 337 374 - -
Alju01g2402 374 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 352 IPR040390 -
Alju01g2402 374 SMART tify_2 181 216 IPR010399 -
Alju01g2402 374 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Alju01g2402 374 Pfam tify domain 184 215 IPR010399 -
Alju01g2402 374 MobiDBLite consensus disorder prediction 335 374 - -
Alju01g2402 374 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2402 Alju-ChrAlju01 21946841 21950396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2402 34 347 Tify Gene Family AT3G17860 38.596 1.04e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju01g2402 tify 1.1e-17 No_clan