Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2379 ATGTGGATGGTGGGTTATAATGAAGGGACTGATCAGTTCAACATGCCTGATCATGCCTTCAATGGAAGGAAGCTTAGGCCTGTAGTTCCAAGGCCACTGGCTTCACCTATTTCACATCATGCTACAGATTTCTTCACTCAGTGTCACAATCTGGCATCAGTGGGAGATCAAAGCAAGAGGGACTTCAACAATACCCCACCAGTTGTGGTGAGCACAAGGTGGAATCCTACCCCAGAACAGCTGAGAGCTCTTGAAGAGTTATATCGGAGAGGGACAAGAACGCCTTCAGCAGAACAAATTCAGCATATCACAGCACAGCTTAGGAGGTTTGGGAAAATTGAAGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGAGAGAGGCAGAAACGACGTCGTCAAGTGGAATCAGGACACCCAGGCTACGATCTTGATATTGCTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGCGTTTGAAGTTGAACAGACCAGCAAGAACAACTGGCCACCCTCTTCAAACTGCAGTGTCCCTCTCTCTGAGGAATCTGTGTCAATACAAAGAGCAGCAAAAGCAGCTGCTGCTGCAGCAGCAGCAGCAGTTGCAGAGTGTAGAACAGAGGGATGGGTTCAATTCCATGAAGGAGAATTACAACAACAACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGTTACAGCCATCTCCATCTTCTCCTCCCCCTACTACCACCACCACTCCTCCCTCTACAATAACTAGCATTATTGCTACTAATACAGCCACTTTAATGGACCCAACAATGCTCTTAAAGAACCACTGTGATGATAATAATAATCTCAGCCTTTTCATTTCCCCTCTCACTGAAAATATTGGTGTTATCCACTCAAACACAAGTGAAGATGATCTTCTTCATCATAACAACAACCATGTGGAATCTCAAACCCTTCAACTTTTCCCTCTGAGAAGTGGAGGAGGAGATGGCTGCAATAATTTTAATCAGAAAGAGGCGGAGATATTGGTGTCCGCCATGGATTCAAACTTGACCCCAAGCCAGTTCTTTGAGTTCCTTCCGTTGAAGAACTAA 1104 0.4493 MWMVGYNEGTDQFNMPDHAFNGRKLRPVVPRPLASPISHHATDFFTQCHNLASVGDQSKRDFNNTPPVVVSTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVESGHPGYDLDIALEKKDLGASRTAFEVEQTSKNNWPPSSNCSVPLSEESVSIQRAAKAAAAAAAAAVAECRTEGWVQFHEGELQQQQQRRNFMERNATWHMLQPSPSSPPPTTTTTPPSTITSIIATNTATLMDPTMLLKNHCDDNNNLSLFISPLTENIGVIHSNTSEDDLLHHNNNHVESQTLQLFPLRSGGGDGCNNFNQKEAEILVSAMDSNLTPSQFFEFLPLKN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2379 367 ProSiteProfiles 'Homeobox' domain profile. 77 132 IPR001356 GO:0003677
Alju01g2379 367 Pfam Homeodomain 72 131 IPR001356 GO:0003677
Alju01g2379 367 SUPERFAMILY Homeodomain-like 72 136 IPR009057 -
Alju01g2379 367 Gene3D - 70 131 - -
Alju01g2379 367 SMART HOX_1 69 136 IPR001356 GO:0003677
Alju01g2379 367 FunFam WUSCHEL-related homeobox 4 71 138 - -
Alju01g2379 367 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 57 362 IPR044555 GO:0003700|GO:0099402
Alju01g2379 367 CDD homeodomain 72 133 IPR001356 GO:0003677
Alju01g2379 367 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2379 Alju-ChrAlju01 21505341 21507540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2379 1 367 Wox Gene Family AT3G18010 36.700 6.88e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju01g2379 Homeodomain 1.5e-19 CL0123