Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2357 ATGAGAAGGCCTTCCTCTGAGAAACGATCTTGGTCCAAAGAAGAAGACCAGAAACTCGTTGATTACGTTCAAAAATATGGTGAACGTTGCTGGCCTTCACTTCCTCGGGCCACAGGGTTGCGTCGCTGTGGGAAAAGCTGTCGGTTGAGATGGTTAAATTATCTGAAGCCTGATATTAAAAGAGGAGACTTCGGAGAAGATGAAGAGGACTTGATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGTCATTGATAGCGGGAAGATTACCAGGAAGAACTGATAACGAGGTGAAGAATTATTGGAACTGTCACATAAGAAAGAAGCTTATTCAGATGGGTCGACATGATCGCAATAATAGTAATGTTGGTGATCGCTTTATTAAAGGATCTACACTTAATAATAATAATATTGCAAATCACAAGGATGATCATGAAGCTTCCAATGTAGTCAACAGCTTGCGTAATAATATTACTACTGATAATAATCTTATCGACGACGGAGAAGAAGAAGAAGGCGACGGCCACCATCAAGTATCTGAGTCTTCAACAAGCAAGCCCAATTTCAACCTCAACGCTTTTCCTGATCTGAATCTTGATCTCACACTCACTACTACTTATCACTCTAATGATCATTAA 639 0.41 MRRPSSEKRSWSKEEDQKLVDYVQKYGERCWPSLPRATGLRRCGKSCRLRWLNYLKPDIKRGDFGEDEEDLIIRLHALLGNRWSLIAGRLPGRTDNEVKNYWNCHIRKKLIQMGRHDRNNSNVGDRFIKGSTLNNNNIANHKDDHEASNVVNSLRNNITTDNNLIDDGEEEEGDGHHQVSESSTSKPNFNLNAFPDLNLDLTLTTTYHSNDH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2357 212 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Alju01g2357 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Alju01g2357 212 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 177 - -
Alju01g2357 212 MobiDBLite consensus disorder prediction 159 191 - -
Alju01g2357 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Alju01g2357 212 CDD SANT 66 106 IPR001005 -
Alju01g2357 212 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Alju01g2357 212 Pfam Myb-like DNA-binding domain 61 103 IPR001005 -
Alju01g2357 212 FunFam MYB transcription factor 62 118 - -
Alju01g2357 212 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Alju01g2357 212 CDD SANT 10 55 IPR001005 -
Alju01g2357 212 Gene3D - 63 149 - -
Alju01g2357 212 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
Alju01g2357 212 Gene3D - 8 60 - -
Alju01g2357 212 FunFam MYB-related transcription factor 7 60 - -
Alju01g2357 212 SMART sant 7 57 IPR001005 -
Alju01g2357 212 SMART sant 60 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2357 Alju-ChrAlju01 21168121 21170009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2357 2 203 MYB Transcription Factor Family AT4G09460 46.377 1.54e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g2357 Myb_DNA-binding 6.5e-14 CL0123