Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2352 ATGATGATGATGATACCATCACAGACAGTTTGTCACTTTTGGGTTTCAATAAGAGTACAAGATCAACATAGATCATGCAGGTGGTTAAATTGTGAAGATCCCTTGATCAATCATAGCCCATGGACCTGTGACGAGGACAAGTTGCTGTTGCACATAGTCCAAGAGATTGGCAATAGGAATTGGTTTAAAATTGCTGAATCACTAAGCACAAATAGGACCCCATTTCAATGCTTGGCACGATACCAAAGGAGTTTAAATCCTTCCATGCTAAATAGTGAATGGACTGAGGACGAAGATGATCAACTAAGGCATGCTGTTGCACATTTTGGTGTGAGCAATTGGCAGTCTGTAGCTTCTGTATTAGAACGAAGGACTGGAACTCAATGCTCTAATAGATGGAAGAAGTCTCTCTGTCCTGATAGGAAAGGGAGCTTTACTGTAGAAGAAGATGAGCGCTTAACAGTGGCCGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAAATTCATTCATGGCCGAACCCAAGCTCAGTGTAGAGACAGATATGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGTTGGACTAAGGAAGAAGATTTGAGATTGAAAGAAGCAATTGCCAGACATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCCATGCTTCAAGCAGCTAGAAAGATGCAAAAGTCAGCTCTAATCAGTAACTTTGTTGATCGAGAGTCTGAACGTCCTTGCCTTTCTTTAAACGATTTTCTTCCCTTGGCAATGTTAGATCCACCATCTGATCCAGATGCCGTGAACCTTCCTCAGAAGCGGAAGCGGAAGAGTCAGTCAAGCAATACTTCTAAGAACAAGAGGCCTCAAAAACGCACAAAAAAGGCTCAAAGTTGTCTTAAGAACAAGAGGCCTAAAAAATGCATAATAAAGTCTCAAAGTTGTCTCAGGAAAGTACAAGCTGACAAGGTTGAGCCTTGTAGTGGACATGGTATCCACAAGCCAAAGATTAGTGAACCACATTTGGAGGACAACTCTGTTGAAGCAGTGCATGATCATTCCCCGCTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTAGGTGGACATAACAATATGGATAAGCTAATTTGGTCAAATCAAATGCGGAATGGTTTTAATGAATTACATGAAGAGAGCCATACTTGTATAACATCCTGTGAGAATCCAAAAGCAGGGACACCAGGTGGGCATTGTGAGAAAATCTCTTCTATGGACTCATTGAAACACCAAACTGGAAGAAAGTCAACGCTATCTGCAAGTGTATCTGATGGTGCAGCTGTTGGTAGCAAGGTTGCAAGAAATACTACTTCAGTGAAGGAAAGAAAGAAGAAAGGGAAACGTGACAGAATGGTTAGAAGTGTTCAAACAGCAGAGGACCACATGGTTAAGAATAAAATGCCAAAACCTGTAAGCCTATCTTCTATGCCGATTTTAGAAAGCCAGGATGAAGATAATACAACTCTTGCTAGAGATTTATGCGATCTATCAAGCAAACGGTTTAAAAATACCGATAAAATGACTCAGGCTGCTTCCTATCCTAGTTGTTCCATTAAAAAATCACGGAGATCTCGTCGAGCTTCCAAACAAACTCTTGATTGCCTGTCTTCTAGTTTGAAAAAGGAATGTGAATTGCTTTCTGAAGAAGTGCACAACGGTCATGACAGAAACCAAGAAATGTTGGTCATGCAAGACAAGAATTTAGATAAAGATTGTATTGATGTTACACCTGGGGCTCTGCTGGTTCAGAATCATTCTTGCAATTTGAAGAACATGTCAACCATTGGAGCTGATGACAATGGGAAGGCAATGTCAGGGCCAGTTGATGAGCAGACTATGTTTTTGGATGGTGCGACAGAACCCAAAAACATCATAGTTGGAGAGGATGAAGCTACTGACGTCACCCTTGCTTCCTTCCTGAAAAAGAAGAAAAGCAAGGGCAAGGCAATGGCAGAGCCAGTTGATGAGCAGGCTATGGTTTCAAATGGTTTGACAGAAACCAAAAGCACGAGTGTTGGAGATGATGGGTCTCTTGATGTTACTCTTGCTTCCTTGCTGAAAAAGAAAGGAAGGAGACAGGGTAGAGCAGCTAAATGTGGCAAACGTCTTTCTCTTGATGTGACTAAATGA 2241 0.4217 MMMMIPSQTVCHFWVSIRVQDQHRSCRWLNCEDPLINHSPWTCDEDKLLLHIVQEIGNRNWFKIAESLSTNRTPFQCLARYQRSLNPSMLNSEWTEDEDDQLRHAVAHFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTVEEDERLTVAVHLFGRKWNQIAKFIHGRTQAQCRDRYVNSLDPSLKWGGWTKEEDLRLKEAIARHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMQKSALISNFVDRESERPCLSLNDFLPLAMLDPPSDPDAVNLPQKRKRKSQSSNTSKNKRPQKRTKKAQSCLKNKRPKKCIIKSQSCLRKVQADKVEPCSGHGIHKPKISEPHLEDNSVEAVHDHSPLDLVVTTTNGQGDLGGHNNMDKLIWSNQMRNGFNELHEESHTCITSCENPKAGTPGGHCEKISSMDSLKHQTGRKSTLSASVSDGAAVGSKVARNTTSVKERKKKGKRDRMVRSVQTAEDHMVKNKMPKPVSLSSMPILESQDEDNTTLARDLCDLSSKRFKNTDKMTQAASYPSCSIKKSRRSRRASKQTLDCLSSSLKKECELLSEEVHNGHDRNQEMLVMQDKNLDKDCIDVTPGALLVQNHSCNLKNMSTIGADDNGKAMSGPVDEQTMFLDGATEPKNIIVGEDEATDVTLASFLKKKKSKGKAMAEPVDEQAMVSNGLTETKSTSVGDDGSLDVTLASLLKKKGRRQGRAAKCGKRLSLDVTK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2352 746 ProSiteProfiles Myb-like domain profile. 141 187 IPR001005 -
Alju01g2352 746 MobiDBLite consensus disorder prediction 284 326 - -
Alju01g2352 746 CDD SANT 196 238 IPR001005 -
Alju01g2352 746 MobiDBLite consensus disorder prediction 300 326 - -
Alju01g2352 746 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 142 182 IPR017930 -
Alju01g2352 746 MobiDBLite consensus disorder prediction 727 746 - -
Alju01g2352 746 SUPERFAMILY Homeodomain-like 89 183 IPR009057 -
Alju01g2352 746 Gene3D - 92 141 - -
Alju01g2352 746 Gene3D - 39 89 - -
Alju01g2352 746 Gene3D - 142 192 - -
Alju01g2352 746 Gene3D - 193 240 - -
Alju01g2352 746 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 141 IPR017930 -
Alju01g2352 746 ProSiteProfiles Myb-like domain profile. 188 238 IPR001005 -
Alju01g2352 746 MobiDBLite consensus disorder prediction 455 472 - -
Alju01g2352 746 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Alju01g2352 746 SUPERFAMILY Homeodomain-like 167 241 IPR009057 -
Alju01g2352 746 ProSiteProfiles Myb-like domain profile. 86 137 IPR001005 -
Alju01g2352 746 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Alju01g2352 746 SMART sant 141 189 IPR001005 -
Alju01g2352 746 SMART sant 37 87 IPR001005 -
Alju01g2352 746 SMART sant 192 240 IPR001005 -
Alju01g2352 746 SMART sant 90 139 IPR001005 -
Alju01g2352 746 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 27 712 - -
Alju01g2352 746 CDD SANT 93 137 IPR001005 -
Alju01g2352 746 CDD SANT 144 187 IPR001005 -
Alju01g2352 746 MobiDBLite consensus disorder prediction 542 568 - -
Alju01g2352 746 Pfam Myb-like DNA-binding domain 41 102 - -
Alju01g2352 746 Pfam Myb-like DNA-binding domain 145 204 - -
Alju01g2352 746 MobiDBLite consensus disorder prediction 455 494 - -
Alju01g2352 746 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Alju01g2352 746 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 242 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2352 Alju-ChrAlju01 21118886 21122570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2352 14 321 MYB-Related Transcription Factor Family AT3G18100 54.487 1.11e-108 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g2352 Myb_DNA-bind_6 1.2e-14 CL0123