Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2332 ATGAGCGAAAGCTCGCAGTCTCAGTCTGCCAGTGGAAATGGAAGTGTAAATGTGGAGCCTCAGGACCCAAGATCAAACCCTAATCACAAGCGGGAGGCTTATTCAGAAACTAATGATCTGACAGCAAAGAAATCGAGAACTGAAGCTTCGACTGTGCCTGATGCTTCCGGCAGTGAAGCAGAAGGGAACTCAGGAGCTGTTTCAGGTCAAGAGAATGGCAAGGAACTGAGAGAAGGGAACTCAGGTGCTGTTTCAGGTCAACATAATGCCAAGGAACTAACATTCGAGATTGAGGCAGACGCAGCTGAGGATAAGGGGTCTAGGCATACAATGGAAGATGCCTGGGTAGTGCTTTTGGACGCCAGTTTATATCACCCTGGAAAACTGAGATGTGCACACTTTGCAATCTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAACCATTTGCATGAAAATGTTCTTTCAACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTTGAAGGTTTTCACAAAACTGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACGGCTGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTTGCAAATATAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAGCTGTAACCGATGGATCCCAAAATCATTCAGATGGAGTCCATGCATTAAAGGCCATTGTTTTGACGAGGGAACACAAGGCAATCTACCCACAGGAACGGGCTCGTATTCAGAAGGCTGGTGGTGTTGTGAGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTTAGTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTATGGGGGGTATTTGGTCCCAGTGATGCAGTTAATTTTGTTCAGAAACTATTGAGTGAAGGGTTACCTGTTACAACCGTGACCCGCCATCTTGTAAGGGAAGCTGTTCGTGAGCGGCACTGTAAGGATAATTGCACTGCAATTGTTATTGTATTCAAGCGTAAGTAG 1128 0.4592 MSESSQSQSASGNGSVNVEPQDPRSNPNHKREAYSETNDLTAKKSRTEASTVPDASGSEAEGNSGAVSGQENGKELREGNSGAVSGQHNAKELTFEIEADAAEDKGSRHTMEDAWVVLLDASLYHPGKLRCAHFAIYDGHGGRLAAEYAQNHLHENVLSTGLPRELLDVKVAKRAILEGFHKTDESLLQESAAGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSAVTDGSQNHSDGVHALKAIVLTREHKAIYPQERARIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVSATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVNFVQKLLSEGLPVTTVTRHLVREAVRERHCKDNCTAIVIVFKRK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2332 375 PANTHER PROTEIN PHOSPHATASE 2C 50 370 IPR015655 GO:0004722|GO:0006470
Alju01g2332 375 FunFam Probable protein phosphatase 2C 67 86 374 - -
Alju01g2332 375 Pfam Protein phosphatase 2C 102 359 IPR001932 -
Alju01g2332 375 Gene3D - 81 374 IPR036457 -
Alju01g2332 375 CDD PP2Cc 102 372 IPR001932 -
Alju01g2332 375 MobiDBLite consensus disorder prediction 44 70 - -
Alju01g2332 375 ProSiteProfiles PPM-type phosphatase domain profile. 98 372 IPR001932 -
Alju01g2332 375 MobiDBLite consensus disorder prediction 1 23 - -
Alju01g2332 375 SMART PP2C_4 88 370 IPR001932 -
Alju01g2332 375 MobiDBLite consensus disorder prediction 24 43 - -
Alju01g2332 375 SUPERFAMILY PP2C-like 96 373 IPR036457 -
Alju01g2332 375 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2332 Alju-ChrAlju01 20901501 20909844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2332 27 324 PP2C-type Phosphatase Gene Family AT1G18030 67.559 4.40e-138 394