Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2318 ATGGATCCACCACCGCCGGCACCACCGGTCCAAGCAGCTCCGGCTCAGTTGATGAACGGACCGGAGTCAGTGGAAAGCTCTCCTCGTTCCCGCATTGTTGAAAACTGGGTTGATGAGCCTCTTCCTCTTGTTCCCGGAGCCAGGCTTCGCTTGATGTGCAGCTATGGTGGCCACATCATGCCACGTCCACATGACAAGACACTCTGCTACGTCGGCGGCGACACCCGTATCATCGTCGTCGATCGTCACTCCTCCCTCAAGGAGCTCTGTTGCCGGCTCTCTCGTACCCTCCTAAATGGCCGACCCTTCACACTTAAATACCAACTACCCCATGAAGATCTCGACAATCTCATAACTGTCTCCAACGACGAAGATTTAGAGAACATGATCGAAGAACACGAGCGTTTAACGGCGGCGGCGTCTCCTCCTAGGCCCATAAGGTTAAGGCTGTTTATCTTTTTCTCCAAGCCAGAGACTACAGTTTCAATGGGGTCACTCCTTGATGATGCCAAGTCAGAGACATGGTTCGTGGACGCTCTTAACAACTCCGGGATTCTCACCCGTGGCGTGTCGGATTCCGCCACGGTTGACGGCGGCGTCGTGAACCTTGATAAGGTTCCGGCTAATGATTCGAGTAATAATTTGGAAGCTCAGGCTACAGAGTTTCAGGATGGTGGTAACAACAACAACAAACAGATCAAGAATTTGGCTGAGGTTCATTCTTTACCAGACTCGCCTCCGGTGGATAATAGTTCTTCATATGGGTCTTCTTCTTCGTCTCCTTCAATGGCTAACCTGCCTCCAATTCGGGTTCGCGTCGATGAAACTGGTAACAGCAGACTGCAGCAAGAACAGAGGACAGGTATTGAGGAACAGTTAGCTCAAATGACATTTGTTGCTTCTGGGATTAAGCAAGATGAAGGTTACACTATGACTATGTTGTCTGCTCCTTTGCCTACAATCCCTGCACCTTTGACCATGGCATCATCACCAGCTTTAGTGACTGGTGATAATCTGAATCGGGTCATCTCTGATGATGAAAGATCCGATCAAGGAGTACCTTCCGGGTTTCGAAAGCCTCCATTGCCATTGCAGCTTGTACAACAAAAGACTGGTGGTGGTGGTTGTTTAAACTTGCCTTCTCCAGATTCAGTCGCAAGTGATAGCAGTATTGCTTCAGCAACCTCTTTCTCAAGGTCTGTTTACTATCAGGACCAAGTCCAAGCTGCATATACAGATCAGAAAGCACCAGTATTATCACATTCTAAGGGTGACATATCAGATCCCAATTTTGGATACCAAAGAGAACGAGTCCAGGATCTTAATTACACAGTAACCCCACAAATGGATCAAAATCAGCAACTCCAGCAACATCATCAACAACAACAACTTGTTCCTGCCAATACCCATTATATCCCCCACCCAGCAACAGCCACAGGTCAAGTTCCAATGTCATCCTACTACCAAGTTTATGCCACACCTTCACAACAGCAAATTCCTCATCCAATTAATCAGCAGTACCCAGTTTATGTGATGCCTGTAGGGCATGCTCAACCTTATAATATGACTGTACAAGCTGACCCTAATGTGATAGCCTCAAGCAGGCCATTAATACCATCCCAAAGTGTTGCTGGTACTCCTCCTGTTTACCCCACTAAGCCAGCCACTCCTTCCATACCTGTGCCTCCCACTCAAGCATTTGTTCAAATACCTTCCGGGCAATATCAGCAGCAACACTTTGTGGGCGTGCCTCAAATCCATCATCAACCACAATCAATAGCAGTTGCTTCCTCTGCTGCTTCTGTTCCTGTTCCTGCTACTACAAGTAATAATTATGGTTATGATTATGGTGGACCTGCACAAGAACAAGCATACTACATACAACAACAGCAGCAGAACACTACTCCTACTTTGCCTTCTCACTACCAGTCCATAACCCCGGCGGCGGCCGTGGCGGTGGCGGCACTTTCAGATGCATCAAAGCAATTTCCGGCAGAGAGCATTCAGCAGCCGAACAGAACCACACCACAGCCATTGTGA 2040 0.4819 MDPPPPAPPVQAAPAQLMNGPESVESSPRSRIVENWVDEPLPLVPGARLRLMCSYGGHIMPRPHDKTLCYVGGDTRIIVVDRHSSLKELCCRLSRTLLNGRPFTLKYQLPHEDLDNLITVSNDEDLENMIEEHERLTAAASPPRPIRLRLFIFFSKPETTVSMGSLLDDAKSETWFVDALNNSGILTRGVSDSATVDGGVVNLDKVPANDSSNNLEAQATEFQDGGNNNNKQIKNLAEVHSLPDSPPVDNSSSYGSSSSSPSMANLPPIRVRVDETGNSRLQQEQRTGIEEQLAQMTFVASGIKQDEGYTMTMLSAPLPTIPAPLTMASSPALVTGDNLNRVISDDERSDQGVPSGFRKPPLPLQLVQQKTGGGGCLNLPSPDSVASDSSIASATSFSRSVYYQDQVQAAYTDQKAPVLSHSKGDISDPNFGYQRERVQDLNYTVTPQMDQNQQLQQHHQQQQLVPANTHYIPHPATATGQVPMSSYYQVYATPSQQQIPHPINQQYPVYVMPVGHAQPYNMTVQADPNVIASSRPLIPSQSVAGTPPVYPTKPATPSIPVPPTQAFVQIPSGQYQQQHFVGVPQIHHQPQSIAVASSAASVPVPATTSNNYGYDYGGPAQEQAYYIQQQQQNTTPTLPSHYQSITPAAAVAVAALSDASKQFPAESIQQPNRTTPQPL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2318 679 SUPERFAMILY CAD & PB1 domains 64 164 - -
Alju01g2318 679 MobiDBLite consensus disorder prediction 1 26 - -
Alju01g2318 679 SMART PB1_new 63 153 IPR000270 GO:0005515
Alju01g2318 679 ProSiteProfiles PB1 domain profile. 48 153 IPR000270 GO:0005515
Alju01g2318 679 CDD PB1_UP2 52 153 - -
Alju01g2318 679 MobiDBLite consensus disorder prediction 370 389 - -
Alju01g2318 679 Pfam PB1 domain 65 153 IPR000270 GO:0005515
Alju01g2318 679 MobiDBLite consensus disorder prediction 240 267 - -
Alju01g2318 679 PANTHER OS05G0427100 PROTEIN-RELATED 21 499 - -
Alju01g2318 679 MobiDBLite consensus disorder prediction 245 265 - -
Alju01g2318 679 Gene3D - 66 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2318 Alju-ChrAlju01 20699127 20701247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2318 48 182 MAP Kinase Kinase Kinase AT5G57610 44.526 9.53e-25 108