Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2301 ATGGTTGTCGGAGCAGGAGGGTTTGAAATAAGAAATAAAGTCATTGTAGGTGTTGTTAGTGCTGTAGTCGTTAGTGGAGCAATTGGACTGCTGCTTTTATCTACTACTAATTGTTGTTGTAAAATCAAATCTTGGAGGCGAAGAATAGGAGTATGCTTGACATCTGAGGTTGACCAAAATATTGAAACCTTTATTAGAAATTATGGTGCTCTAGCTATCACAAGATATAAATTTGCAGATGTCAAGAAAATGACCAACTCTTTCAAAAAGAAATTGGGACAAGGTGGTTATGGTTCTGTATACAAAGGAAAATTACTCGATGGCCACCCTGTTGCTGTAAAGTTATTGAAGGCAACGAAAGAGAATGGTGAAGACTTTATCAATGAGGTTGCTAGCATTAGTAGGACCTCCCATGTAAATGTTGTTACCCTTCTTGGGTTTTGTTTTGAAGGCAAACATAAGGCTCTTATTTATGAATTTATGTCCAATGGATCTCTTGACAAATTCATTCACAACAACTCAAATCAAAATAGTCTATGCTTGACTTGGGAAAAGTTGTGCCAAATTGCAATTGGGATAGCCCGAGGACTTGAGTATTTGCATAGAGGATGCAACACCCGAATTCTACATTTTGATATAAAGCCCCATAATATCCTTTTAGATGAAAGATTTTGTCCCAAGATATCAGATTTTGGTCTTGCTAAGCTATGTCCAAAAAAAGAAAGTATCATTTCAATTTCAGAAGCAAGAGGAACAGTAGGATATCTTGCTCCAGAAGTTTGGAATAGAAACATAGGTGGAGTTTCCCAGAAATCTGATGTTTATAGCTATGGGATGATGTTGTTAGATATGGTTGGTAGGAGAAAGAACATGATTGTTGAAACCAATTGTTCAACTGATAAATATTTTCCGGATTATATTTATGATCAACTTGATCAAGATGGCAGTTTGGGATGTAATGGGGCCAATAACACGGGGGAAAATGATATTGTAAAGAGAATGACCATTGTGGCTTTGTGGTGTATCCAAACATTCCCAAGCCACAGACCTACAATGAGTAGGGTGATTGAAATGTTTGAAAGAAGACTTGACTTGTTGGAAATACCACCAAAACCTGTGATTTCTTCCCCTCCAAGATTAGAACCAGAATCTTCTACCACTACTAATACCACAACATAG 1179 0.3707 MVVGAGGFEIRNKVIVGVVSAVVVSGAIGLLLLSTTNCCCKIKSWRRRIGVCLTSEVDQNIETFIRNYGALAITRYKFADVKKMTNSFKKKLGQGGYGSVYKGKLLDGHPVAVKLLKATKENGEDFINEVASISRTSHVNVVTLLGFCFEGKHKALIYEFMSNGSLDKFIHNNSNQNSLCLTWEKLCQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDERFCPKISDFGLAKLCPKKESIISISEARGTVGYLAPEVWNRNIGGVSQKSDVYSYGMMLLDMVGRRKNMIVETNCSTDKYFPDYIYDQLDQDGSLGCNGANNTGENDIVKRMTIVALWCIQTFPSHRPTMSRVIEMFERRLDLLEIPPKPVISSPPRLEPESSTTTNTTT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2301 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Alju01g2301 392 SMART serkin_6 86 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2301 392 Gene3D Transferase(Phosphotransferase) domain 1 161 366 - -
Alju01g2301 392 PANTHER RUST RESISTANCE KINASE LR10-RELATED 58 381 IPR045874 GO:0004672
Alju01g2301 392 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Alju01g2301 392 FunFam PR5-like receptor kinase 161 371 - -
Alju01g2301 392 Pfam Protein tyrosine and serine/threonine kinase 88 358 IPR001245 GO:0004672|GO:0006468
Alju01g2301 392 MobiDBLite consensus disorder prediction 370 392 - -
Alju01g2301 392 Gene3D Phosphorylase Kinase; domain 1 52 160 - -
Alju01g2301 392 FunFam serine/threonine-protein kinase PBS1-like 55 160 - -
Alju01g2301 392 SUPERFAMILY Protein kinase-like (PK-like) 67 360 IPR011009 -
Alju01g2301 392 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2301 Alju-ChrAlju01 20521849 20523127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2301 58 375 Receptor kinase-like Gene Family AT4G18250 56.575 1.61e-122 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju01g2301 PK_Tyr_Ser-Thr 5e-46 CL0016