Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2295 ATGACAAAATCTTTCCAAGTTAAATTGGGACAAGGTGGTTATGGTGCTGTGTACAAAGGAGAACTACTCAATGGTTATCCTATTGCTATCAAATTGTTGAAGTCATCAAAAGGGAATGGGGAAGACTTTATCAATGAGGTTGCTAGCATAAGTAAAACTTCCCATGTAAATGTTGTTACCCTTCTTGGGTTTTGTTTGGAAGGTCGAAAAAAGGCTCTTATCTATGAGTTCATGCCAAATGGATCTCTTGATAGGTTTATTTCTAATACAACAAATAAAACTAGTCCATCCTTAACTTGGGAAAATTTGTATCAAATTGCAATTGGGACAGCTCGAGGACTTGAATACTTGTATAGAGGATGTAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTAGATGAAGGTTTTTGTCCTAAGATATCAGATTTTGGACTTGCAAAGCTATGTCCTAGAAAAGAAAGCATTGTTTCAATTTCAGAAGCTCGAGGAATAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATAGGAAGAGTTTCACATAAATCTGACGTTTTCAGTTATGGAATGATGCTACTAGATATGGTTGGTGAGCGTAATAATATGAATGTTGAAGGCTATACAACAGAGATATATTTTCCAGATTGGGTTTATGATAAACTTGAGCAAGGAAGTAAGTTGGGACAGGATGGGACAAACACCATGGAGGAAAATGATATTGCAAAGAAAATGACCATTGTGGGATTGTGGTGTATTCAAACATTTCCAACTCAAAGACCAACAATTAGTAGAGTTATTGATATGTTAGAGGGAAGCTTAGAGTCTCTGGAAATGCCACCAAAGCCTGTCATGCTTTCCCCTGCTAGATTAGAACAAGAATTGTCTACAACTTGCAATACCAAGTCAGAAGAAGTTGATTCTGGAAAAAAGGTCTTCGCCAATACCATTGGAGGCCCACTAGATGATTAG 987 0.3658 MTKSFQVKLGQGGYGAVYKGELLNGYPIAIKLLKSSKGNGEDFINEVASISKTSHVNVVTLLGFCLEGRKKALIYEFMPNGSLDRFISNTTNKTSPSLTWENLYQIAIGTARGLEYLYRGCNTRILHFDIKPHNILLDEGFCPKISDFGLAKLCPRKESIVSISEARGIIGYLAPEVWNRNIGRVSHKSDVFSYGMMLLDMVGERNNMNVEGYTTEIYFPDWVYDKLEQGSKLGQDGTNTMEENDIAKKMTIVGLWCIQTFPTQRPTISRVIDMLEGSLESLEMPPKPVMLSPARLEQELSTTCNTKSEEVDSGKKVFANTIGGPLDD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2295 328 FunFam PR5-like receptor kinase 78 287 - -
Alju01g2295 328 Gene3D Phosphorylase Kinase; domain 1 9 78 - -
Alju01g2295 328 PIRSF ILK 3 284 - -
Alju01g2295 328 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2295 328 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 298 IPR045874 GO:0004672
Alju01g2295 328 ProSiteProfiles Protein kinase domain profile. 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2295 328 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Alju01g2295 328 SUPERFAMILY Protein kinase-like (PK-like) 7 276 IPR011009 -
Alju01g2295 328 Pfam Protein tyrosine and serine/threonine kinase 5 275 IPR001245 GO:0004672|GO:0006468
Alju01g2295 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Alju01g2295 328 Gene3D Transferase(Phosphotransferase) domain 1 79 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2295 Alju-ChrAlju01 20437019 20438005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2295 1 302 Receptor kinase-like Gene Family AT1G66910 58.252 2.32e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju01g2295 PK_Tyr_Ser-Thr 8.6e-43 CL0016