Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2293 ATGACAAAATATTTCCAAGTTAAATTGGGACAATGTGGTTTTGGTGTTGTATACAAAGGAGAACTACCCAGCGGTTGTCCTACTGCTATCAAATTGTTGAAGTCATCCAAAGGGAATGGGGAAGACTTTATCAATGAGGTTTCTAGCATCAGTAAGACTTCCCATGTAAATGTTGTTACCCTTGTTGGATTTTGTTTGGAAGGCCCAAAAAAGGGTCTTATATGGTCCATAGGATATATTGCTCCAGAGGTTTGGAATAGAAATATTGGAGGAGTTTCCGATAAATATGACGTTTTTAGTTATGGAATGCTGCTGTTAGATGTAGTTGGCCTCTGCCGACTCGACGCCAAAGCACAATTTTATTGTTCCAAATCCAAAGTTCAAAAAAGGAATCGAGATGCTGACAGTCGTCTCAATCCGCCGCCTGTGGGAGGCATAATAGGAAATTCACGGCCTGACAAGACTAAACTTATAATAGGTTTAACAAGTGGAGCAATTGGAACAATGCTGATATGTATTATTATTTTTTGTTGTATAATCAAATCATTGAGGCAGAAACTAGAGTTCTTGAAGAAATCCAGGCCTGACCAAAATGTCGAGGATTTCATTAGAAACCACGGGCCTCTAGCTCTCAAAAGATATAAATATGCGGAGGTGAAAAAAATGACAAAATCTTTCCAAGTTAAATTGGGACAAGGTGGTTATGGTGCTGTATACAAAGGAGAACTACCCAGTGGTTGTCTTGTTGCTATCAAATTGTTGAAGTCATCCAAAGGGAATGGGGAAGACTTTATCAATGAGGTTTCTAGCATCAATTTTGGACTTGCAAAGTTGTGTCCTAAGAAAGAAAGCATTGTTTCAATTTCAGAAGCGCGGGGAACTATAGGATATCTTGCTCCAGAGGTTTGGAATAGAAATATAGGAAGAGTTTCCCATAAATCTGACGTTTTTAGTTACGGAATGTTGCTATTAGATATGGTTGGTGAGCGAAAGAATATAAATGCTGAAGACAACACAACAGAGATTTATTTTCCAGATTGGGTTTATGATAAACTTGAGCAAGGCAACGTTTCCAACTCAAAGACCAACAATTAG 1095 0.3836 MTKYFQVKLGQCGFGVVYKGELPSGCPTAIKLLKSSKGNGEDFINEVSSISKTSHVNVVTLVGFCLEGPKKGLIWSIGYIAPEVWNRNIGGVSDKYDVFSYGMLLLDVVGLCRLDAKAQFYCSKSKVQKRNRDADSRLNPPPVGGIIGNSRPDKTKLIIGLTSGAIGTMLICIIIFCCIIKSLRQKLEFLKKSRPDQNVEDFIRNHGPLALKRYKYAEVKKMTKSFQVKLGQGGYGAVYKGELPSGCLVAIKLLKSSKGNGEDFINEVSSINFGLAKLCPKKESIVSISEARGTIGYLAPEVWNRNIGRVSHKSDVFSYGMLLLDMVGERKNINAEDNTTEIYFPDWVYDKLEQGNVSNSKTNN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2293 364 ProSiteProfiles Protein kinase domain profile. 3 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2293 364 Pfam Protein tyrosine and serine/threonine kinase 272 328 IPR001245 GO:0004672|GO:0006468
Alju01g2293 364 Pfam Protein tyrosine and serine/threonine kinase 6 71 IPR001245 GO:0004672|GO:0006468
Alju01g2293 364 Gene3D Phosphorylase Kinase; domain 1 1 76 - -
Alju01g2293 364 Gene3D Phosphorylase Kinase; domain 1 198 270 - -
Alju01g2293 364 Gene3D Transferase(Phosphotransferase) domain 1 271 363 - -
Alju01g2293 364 SMART tyrkin_6 5 352 IPR020635 GO:0004713|GO:0006468
Alju01g2293 364 SUPERFAMILY Protein kinase-like (PK-like) 8 110 IPR011009 -
Alju01g2293 364 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 75 IPR045874 GO:0004672
Alju01g2293 364 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Alju01g2293 364 SUPERFAMILY Protein kinase-like (PK-like) 212 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2293 Alju-ChrAlju01 20398974 20408977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2293 144 356 Receptor kinase-like Gene Family AT1G66930 33.922 4.32e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju01g2293 PK_Tyr_Ser-Thr 1.1e-06 CL0016