Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2284 ATGGATAATCATCCTATTCCTTCTTTGCTTAAATCCATAGTCACCATCACCTTCTTCTTCTTCTCAATAGCTTTGCCACAATCCTATGCTCAAAAAAATGATACATACTCTGTGTGTAGCCAACCTTATAGTTGTGGATATCTCACAAACATTTCCTACCCTTTCTGGGGACAAAACAGACAGAGTTTTTGTGGCAAAAATGGCTTCCACCTCATGTGCCAGAATAATCTAAACACTACAATTCAATTTGGCTCACAAACTTTCAACGTACTGCAAATAAACCAAACCGGTTTTACCCTGCGACTTGCGCTACCAGAATCATCATACAATCTTTGTCCTCCTAATATCTCCAACACTTCTCTGAGTGGAAGTCCCTTCAGTTTCCTCCCCAATACAGTTCAGAATATCACTGTGTTCTACGATTGTCCCCTCCAGATTTCTGGGATTAACAGCTTCAAGTGCCAGAACAATTCTAGTAAACAAGCTTTCTATGTGAACGGAACCCAGTTGCAGCAAGCTTCAGGATTTGAAAGATGTGGGTATCGTGTTCAAGTGCCAGTTTCAGTGGATATTCCCTTGGATTCGCTCAAGAATGCTCTGGATGAAGGGTTTGATGTGAGGTATGTTGATCCTGAGTGTGAAAGATGCAAGGATTCTGGAGGAATATGTGGAACTTACCAGAATAATAGCTCTACGTTTTCTTGTTATTGCCCTGATGGAACAACCAACAATTCAACCTGTTCTGCTAGCAGCACTAGCAACAGTAAAAGAAACAAAGTAATGAAGCTAGCTTTAGGTTTTGTGGCTACTGGAATTGGATTGCCTCTCTTAGCAGTCACCATATGCAAAAATAAAGAAAAAATATGGCGGTTCATAAAAAGGAAAATTGGCAACAAGAAGGAGGATAGAAAAATTGAAGCCTTCCTTCAAAGTCAGGGGCCTCTGGCTCTGGAAAGATACAGCTTCTCAGATTTGAAGAAAATGACAGACTCATTCAAAGTTAAGCTTGGAGAAGGAGGCTATGGTGTTGTTTACAAAGGCAAGCTTCTTGATGGTTGCGAAGTGGCCATAAAACTCTTGCATGAAGCGAATGAGGACAGCGAAGAATTCATCAATGAAGTTGCCAGCATAAGCAAAACCTCCCATGTTAATGTTGTCACTCTTCTTGGTTTTTGCATAGAAGGACGTAGAAGAGCTCTAGTCTATGAGTACATGTCCAATGGTTCTCTTGAAAAGTTCATTTCCAAGAAGAAGCCAGGTGATGAAAGTGCTGCATCACTGAGTTGGGATACTTTATATCAGATTGCCAAAGAAACAGCACGAGGACTAGACTACCTTCACAAGGGATGCAACACTCGAATCTTGCATTTCGATATAAAGCCACATAATATCCTTCTGGATGAGAAGTATCACCCAAAGATATCAGATTTTGGGATGGCTAAGCTCAACACGAAAGAGGAGAGCATAATTTCAATATCAAATGCAAGGGGGACAATTGGGTATGTGGCCCCAGAAGTGTGGAATAAAAGCATCGGAGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGGATGATGTTGTTGGAAATGGTTGGGGAACAGAAGAACACTAACATAGGACCCGAAGGAAGCAGCGGGTCTGGAAGCGAGCTGTATTTCCCTCCATTGATGATGTACAAGAAGCTTGAAGCAGGAAGTGATGTGGTAGTGAAAGGGGTGACGAGTGATGAGGAGAATGAGATAGCGAAGAAGATGACAATGGTGGGACTTTGGTGTATACAGACAATTCCTGCTCAGAGGCCAACCATGAGCAGAGTGATTGAAATGTTGGGGGCAAGTATGGATTCTTTGGAAATGCCACCAAAGCCATTTATGTCTTCTCCTTCAACATCACCCTCTGAATCTTCCTTTATATTGACTTCATTTCAGAATAATCTTTGA 1941 0.4152 MDNHPIPSLLKSIVTITFFFFSIALPQSYAQKNDTYSVCSQPYSCGYLTNISYPFWGQNRQSFCGKNGFHLMCQNNLNTTIQFGSQTFNVLQINQTGFTLRLALPESSYNLCPPNISNTSLSGSPFSFLPNTVQNITVFYDCPLQISGINSFKCQNNSSKQAFYVNGTQLQQASGFERCGYRVQVPVSVDIPLDSLKNALDEGFDVRYVDPECERCKDSGGICGTYQNNSSTFSCYCPDGTTNNSTCSASSTSNSKRNKVMKLALGFVATGIGLPLLAVTICKNKEKIWRFIKRKIGNKKEDRKIEAFLQSQGPLALERYSFSDLKKMTDSFKVKLGEGGYGVVYKGKLLDGCEVAIKLLHEANEDSEEFINEVASISKTSHVNVVTLLGFCIEGRRRALVYEYMSNGSLEKFISKKKPGDESAASLSWDTLYQIAKETARGLDYLHKGCNTRILHFDIKPHNILLDEKYHPKISDFGMAKLNTKEESIISISNARGTIGYVAPEVWNKSIGGVSHKSDVYSYGMMLLEMVGEQKNTNIGPEGSSGSGSELYFPPLMMYKKLEAGSDVVVKGVTSDEENEIAKKMTMVGLWCIQTIPAQRPTMSRVIEMLGASMDSLEMPPKPFMSSPSTSPSESSFILTSFQNNL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2284 646 ProSiteProfiles Protein kinase domain profile. 330 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2284 646 Gene3D Transferase(Phosphotransferase) domain 1 405 620 - -
Alju01g2284 646 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Alju01g2284 646 Pfam Wall-associated receptor kinase galacturonan-binding 39 103 IPR025287 GO:0030247
Alju01g2284 646 Gene3D Phosphorylase Kinase; domain 1 292 404 - -
Alju01g2284 646 Pfam Wall-associated receptor kinase C-terminal 154 240 IPR032872 -
Alju01g2284 646 FunFam serine/threonine-protein kinase PBS1-like 298 404 - -
Alju01g2284 646 MobiDBLite consensus disorder prediction 618 646 - -
Alju01g2284 646 Pfam Protein kinase domain 333 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2284 646 PANTHER RUST RESISTANCE KINASE LR10-RELATED 293 629 IPR045874 GO:0004672
Alju01g2284 646 MobiDBLite consensus disorder prediction 628 646 - -
Alju01g2284 646 SUPERFAMILY Protein kinase-like (PK-like) 310 610 IPR011009 -
Alju01g2284 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Alju01g2284 646 FunFam PR5-like receptor kinase 405 622 - -
Alju01g2284 646 SMART serkin_6 330 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2284 Alju-ChrAlju01 20281510 20283662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2284 8 637 Receptor kinase-like Gene Family AT5G38260 39.969 1.44e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju01g2284 Pkinase 3.2e-47 CL0016