Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2282 ATGATGAAGCTCGCATCGTTTTTTCTTCCTCTGTTTTTCTTCTTCATCCACATTGCCTTTGCTAGCAATTCCATTTCATCTTCCTCAGTCTGTCCCACCAATAGCTGTGCCGATGGGCTTCAAATCAGATACCCTTTTTGGCTCTTATCACAAGATTCCCCTCCTGACCAGTACTGTGGTTACCAAGAATTCGGCCTCATCTGCGTTCATGGCTACCCTGTCTTCTTAATACTTGGGTTATATTATTTAGTGACAAATGTTGACTATGATAATCACACCCTTCGCCTTGTTGATTATGGTACTTTCAACCAAACATGTCCAAGGGCATTTCACAGTGTTCCATTGGGCAGCTTACCACTTTCTCACTCCCCTTTGAATTTGAACCTCAGCTTTTATTACGATTGCAGTTCTCACCCCTCTGATGCGACGCCCATAAAGTGTTTGACTTCTGGTGTGAATGAGTCCTTTGTGTTTGTGGAGGGGAACGAGACTGGAGGGAAACGCAGAGCCCTTTTGTCAAAGCTTATTATTGGTTTAATAGCTATAGGGGTGGGAGCTCTGTTAATATGCATCATTATTTTCTTCTTAAGACGAAAAATATCATTAATTATCTCAACAGACTGTTGGAAGACTAAAAAAAAAGATGAAAACATTGAGTCTTTCATCAGAAATTACGGGCCTCTACCTATAAAAAGATATACATTTTCAGAAATCAAGAAAATGACCAACTCTTTTAAAGTCAAATTGGGAGAAGGAGGCTATGGTAATGTGTTCAAAGGAATTATAGTCAACAACTGTCCTGTGGCTGTGAAGGTATTGAATGCATCTAAAGGGAATGATGGAGAGTTTCTCAATGAGGTTGTGAGCATTAGTAGGACTTCACATGTAAATATTGTCACCCTCCTTGGTTTTTGTGTTGAAGGCGGCAAAAAAGCACTCATACATGAACTTATGCCCAATGGTTCACTTGAAAAGTTCATATGCAAGAAAGATTTAGAGCCAAATTATCCACCCTTAAGTTGGGAAAAACTACTCCAAATTGCTGAAGGGATAGCTAAAGGACTTGAGTATTTGCATAGTGGTTGCAGCACTCGAATCTTGCATTTTGACATAAAACCTAGCAATATCCTTTTGGATAAAAACTTTTGCCCCAAGATATCAGATTTTGGGCTGGCTAAACTTTGCTCTAAAACTCATAGTATTGTCTCAATGCTTGATGCAAGAGGAACGTTTGGGTATATTGCTCCGGAAGTATGGAATAGAAACTTCGGAGGAGTCTCCCACAAGTCAGATGTGTATAGCTATGGAATGTTGATTTTGGAAATGGTTGGAGGAAAACAAAACATTGAAAGCGAGATGTGTAATTCAATTGATATGTATTTGCCTCATTTAGTATACAAGCAAATTCAGTTAGACAAGAATATAACAGAAAAAGATGATATGAACAGGGAGGAAAGTGAAATTGCAAAGAAGATAATCATAGTTGGATTGTGGTGCATTCAGCCTATACCATCAGATAGGCCTCCCATGAATAGAGTGATTGAGATGTTGAAAGGGAGCTTGGAACAACTCTCAATACCACCAAAGCCTTTTATGTTTCCACCTATAATTCCAACAAATGGAGAGGAAAATTGTGCTACAAACGGTGTTCTTTCGTTTTCTGCTGATTATCAATATGGTAGATAG 1686 0.3891 MMKLASFFLPLFFFFIHIAFASNSISSSSVCPTNSCADGLQIRYPFWLLSQDSPPDQYCGYQEFGLICVHGYPVFLILGLYYLVTNVDYDNHTLRLVDYGTFNQTCPRAFHSVPLGSLPLSHSPLNLNLSFYYDCSSHPSDATPIKCLTSGVNESFVFVEGNETGGKRRALLSKLIIGLIAIGVGALLICIIIFFLRRKISLIISTDCWKTKKKDENIESFIRNYGPLPIKRYTFSEIKKMTNSFKVKLGEGGYGNVFKGIIVNNCPVAVKVLNASKGNDGEFLNEVVSISRTSHVNIVTLLGFCVEGGKKALIHELMPNGSLEKFICKKDLEPNYPPLSWEKLLQIAEGIAKGLEYLHSGCSTRILHFDIKPSNILLDKNFCPKISDFGLAKLCSKTHSIVSMLDARGTFGYIAPEVWNRNFGGVSHKSDVYSYGMLILEMVGGKQNIESEMCNSIDMYLPHLVYKQIQLDKNITEKDDMNREESEIAKKIIIVGLWCIQPIPSDRPPMNRVIEMLKGSLEQLSIPPKPFMFPPIIPTNGEENCATNGVLSFSADYQYGR 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2282 561 Gene3D Phosphorylase Kinase; domain 1 205 317 - -
Alju01g2282 561 SUPERFAMILY Protein kinase-like (PK-like) 220 517 IPR011009 -
Alju01g2282 561 ProSiteProfiles Protein kinase domain profile. 243 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2282 561 PANTHER RUST RESISTANCE KINASE LR10-RELATED 210 537 IPR045874 GO:0004672
Alju01g2282 561 Pfam Protein kinase domain 246 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2282 561 Pfam Wall-associated receptor kinase galacturonan-binding 31 98 IPR025287 GO:0030247
Alju01g2282 561 SMART serkin_6 243 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2282 561 ProSitePatterns Protein kinases ATP-binding region signature. 249 271 IPR017441 GO:0005524
Alju01g2282 561 Gene3D Transferase(Phosphotransferase) domain 1 318 526 - -
Alju01g2282 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Alju01g2282 561 FunFam PR5-like receptor kinase 318 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2282 Alju-ChrAlju01 20243724 20246436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2282 98 535 Receptor kinase-like Gene Family AT5G38280 46.275 1.83e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju01g2282 Pkinase 1.1e-44 CL0016