Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2267 ATGTCGACTTCAAAGAGCGAGAGTAGTTGCAGTGAAGATGATAATGAACTTAGGAGAGGACCTTGGACTCTTGAAGAGGATGATCTGTTAACTCAGTACATCTCTGCTAATGGGGAAGGAAGATGGAATTTGCTGGCAAAACGTTCAGGGTTGAAGAGAACAGGAAAGAGTTGCAGATTAAGATGGCTTAATTATCTGAACCCACAAGTGAGGCGAGGAAATTTAACCCCAGAAGAGCAGATTTTGATCCTTGAACTCCACTCAAAGTGGGGCAACAGGTGGTCAAAGATTGCACAACATCTTCCGGGGAGGACAGATAACGAAATCAAGAACTACTGGAGAACTCGGATTCAGAAACAAGCGAGGCACTTGAATATGGACACAAACAGCACACAGTTTAAGGAAATCGTCAGGCGATTTTGGATGCCGAGGTTGGTGCAGAAAGCAAGAGAAACATCGGCTTCTGCTTATCTTCCATCGGCCATGTCAATCCAAAACGAGATGATTCCTTTGCCTATTGACAATGTTTCTCAGTGTTCACAAATAGAGACAGTGCCAACACAGATGATTCCTTGGCAGGGACCTAGTGTGATGAATGAAACAATAGTTCAAAACAGTTCATGCCTGTCCTCTTCGTCCTCAGAATCATCAAACATCCCAGAAGTGTCTCAGTTTCAGGCCTTAGATAACAGTGACATGAGCTCATTTTTGTATGATGGGTACTACGTTAATAACAATACCTACGACATGGAAACATTCAATCTGGGAACACCAGTGACAACATCTGACGCTGCTATGGCAGGAAACTGGATTAATAATGATGTTTCATCTTGCAGCATGTGGGGCATGGATGAACTGTGGCAGTTCAAAAACTTGCAAGAATAA 885 0.4316 MSTSKSESSCSEDDNELRRGPWTLEEDDLLTQYISANGEGRWNLLAKRSGLKRTGKSCRLRWLNYLNPQVRRGNLTPEEQILILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLNMDTNSTQFKEIVRRFWMPRLVQKARETSASAYLPSAMSIQNEMIPLPIDNVSQCSQIETVPTQMIPWQGPSVMNETIVQNSSCLSSSSSESSNIPEVSQFQALDNSDMSSFLYDGYYVNNNTYDMETFNLGTPVTTSDAAMAGNWINNDVSSCSMWGMDELWQFKNLQE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2267 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Alju01g2267 294 SMART sant 71 119 IPR001005 -
Alju01g2267 294 SMART sant 18 68 IPR001005 -
Alju01g2267 294 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Alju01g2267 294 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 213 IPR044676 GO:0003700|GO:0006355|GO:0043565
Alju01g2267 294 FunFam Myb transcription factor 19 71 - -
Alju01g2267 294 FunFam MYB transcription factor 76 139 - -
Alju01g2267 294 Gene3D - 75 118 - -
Alju01g2267 294 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Alju01g2267 294 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Alju01g2267 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Alju01g2267 294 CDD SANT 76 115 IPR001005 -
Alju01g2267 294 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Alju01g2267 294 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Alju01g2267 294 CDD SANT 21 66 IPR001005 -
Alju01g2267 294 Gene3D - 19 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2267 Alju-ChrAlju01 20080616 20081670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2267 14 290 MYB Transcription Factor Family AT1G68320 46.528 1.95e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g2267 Myb_DNA-binding 1.9e-14 CL0123