Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2249 ATGCGCCTCAGCTGCAATGGTTGCCGGGTCCTCCGCAAAGGTTGCACTGCCGACTGCCCCATTCGTCCCTGCCTCATCTTGGTTCCCTCTCCTCAATCCCAATCCAACGCCACCCTCTTCCTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATCAACCTCCTCAATTCCGGCGCCCCTCACCTCCGACCAGCGATTTTTAAGTCCTTGCTCTACGAAGCTTGTGGGCGGATTGTGAATCCCATTTTTGGTTCAGCTGGCTTACTCTCTTCTGGAAGCTGGCATCTCTGTCAAGCCGCCGTGGAAGCTGTTCTCAGAGGCGAGCCGATCACTCAGGTTTCGCCTGAATCGGCTTTTGACGGTGTTAGTCCGCTTCTGAAGTCGTGTGATATTCGACATGTGGGTAGAAAGGGAAATTCGTGCGCTTCTGATAAGCTCCACAAGGTGAGAAATGGGAGCCAATTTAAACGCTCCGGTGCGACGAAGAAGAAGGCGGAAGTGGAGCCGGTGGGAGCGGAGCTGATGGCTCATTCGGGGAGCGAGCTGGATGGCTCGGCGGTGAGCGAGCATAGAAGTGGAAGTCCCGGTGGTGAAGCTGATAGCAGCACCGTCGAGACGGCAGAGGGTTGGCCCGCACCGGCGAAGAGCGATGAGAGAAGCGAAGCTGAAGCGGAAGCGGAGGCTGGGGGGTTAGAGCTGGAGTTGACCATGTGGTGGAGTCAACAAGCAAAGGGGAATAGAGAAATCAACGGTTCTGATGCTAACACGTATAAGTTAACGCTTGGCTCTGATCACTCTAATTAG 801 0.5593 MRLSCNGCRVLRKGCTADCPIRPCLILVPSPQSQSNATLFLAKFFGRAGLINLLNSGAPHLRPAIFKSLLYEACGRIVNPIFGSAGLLSSGSWHLCQAAVEAVLRGEPITQVSPESAFDGVSPLLKSCDIRHVGRKGNSCASDKLHKVRNGSQFKRSGATKKKAEVEPVGAELMAHSGSELDGSAVSEHRSGSPGGEADSSTVETAEGWPAPAKSDERSEAEAEAEAGGLELELTMWWSQQAKGNREINGSDANTYKLTLGSDHSN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2249 266 MobiDBLite consensus disorder prediction 244 266 - -
Alju01g2249 266 MobiDBLite consensus disorder prediction 211 225 - -
Alju01g2249 266 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Alju01g2249 266 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 214 - -
Alju01g2249 266 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Alju01g2249 266 MobiDBLite consensus disorder prediction 178 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2249 Alju-ChrAlju01 19894193 19895107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2249 1 203 AS2 family AT3G02550 51.675 9.51e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju01g2249 LOB 4.7e-23 No_clan