Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2240 ATGGCAATTTCTTCCAAGTTTTCTGCTATAAAGCATGAAGTCTATATCAGCTTCAGAGGTACGGACACACGCCATGGTTTTCTCAGCCATTTGAGAAAGGAATTGCGGCGGAAACAAATTGAAGCTTATGCGGATGACAGACTCGAAAGAGGAGATAAAATATCACAGGCACTCTTAAGAGCCATCAAAGAATCACTTATTTCACTCCTCATATTTTCAACGGATTATGCTTCTTCAAGGCTGTGCTTAGAAGAGCTGGTGCAGATTCTTGAGTGCATGGAGAACCAGAAACAGATTGTAATTCCTGTTTTCTATAACACAGATCCCTCACATGTGAGGCATCAAAAAGGGTCTTATGGAGATGCTTTAGCCAAACATGATGAATATTATAAGGAAAAGGTGCCAATTTGGAGATCAGCTTTGAATAAAGCTGCTAACTTATCCGGGTTTCATTATTCATCAAATTATGAGGATGAGGCTGAGTTTATAGAAAAGATTGCCAAAACTTTGTCAACAAGGTTGAATCTTATGTACAAAAGTGACTTCAGAGACCTTGTTGGAATTGATGAAAGAATTGCAGATTTAGAATCACTAATGGACCAAAGATCAAAAGATGTTCGTGTCATTGGAATTTGGGGTATGGGCGGAATTGGTAAGACAACCATCGCCGCTGTAGTGTTTAATCAATTTAGTTCTGAATTTGAAGGACATTGTTTTTTAGCCAATGTGAGAGAAGAATCAAAGAATCGTGGAATTATTCATTTGAAGAATAGAATGTTTTCTATACTACTCAATGAAAATGATTTACATATTGGTACACCAAATGGAATACCCACTCATGTGAAGAGAAGGCTTCTCCGGAAAAGGGTTCTTGTCGTTCTTGATGACATTAGTGATTCAGATCAACTAGAAAATTTACTGGGAGCATTTAATTGCTTTGGACTTGGTAGTAGAATCATTATAACAACTAGAGATAAGCAAGTGCTTGGTAAAAATGTTGATGAAATATATGAGGTTAAGCCTTTGATTTTTGATTATGCTTTTCAACTTTTTATGTTGAATGCCTTTGAGAATAATGATGTGGACTTGGAGTGGATTGTACTATCAAGAAAGGTGATTAGTTATGCTAAAGGCATTCCTTTAGCTCTAAAAGTTTTAGGTTCCTTCCTTTATGGAAAAAGCAGGGAAGAATGGGAAAGCCAACTAGAGAAGCTCAAAAAAATGCCACATGCAAAAATTCAAGATGTGATGAGATTGAGTTATGATGATCTTGATGGAGAAGAGAATAACATTTTCTTATATATTGCATAAATTGTTCGTGAAGAATCCATTGACAACCCTGGAAAACGTAGCCGATTATGGGATGCTAATGATATTTCTCAAGTATTAGAATATAACACGGGCACTAAAACCATTCTAAGCCTTAGTCTAAATGTGGCAAAAATTGAAAGCCTCTGTTTGACTCCTCAAGTCTTTTCTAAGATGACAGAGCTAAAGCTTCTCAAGTTTTCCCAATATGATTTTCATGAACAAATCCTCCACCTTCCTCAAGGCCTTGATTCTTTGCCAAATGAACTCAGATTTTTTGAGTGGGTTTGTTATCCTTTAAAATCCTTGCCTTCCTCATTCTGTCCTAAAAGTCTTGTTGAACTTAAAATGATTTTCAGTCGTGTGGAAAAGCTTTGGGATGGAGTTCTGGATCTTGTGAATTTAAAGAAAATTGACCTCAGTAACTCCAAGCATCTGTTGGAACTTCCAGATTTTTCCATGGCGAAAAACCTTGAAGAAGTAGAACTCTCCAACTGCAAGAGCATGCGTAACGTTCATCCTTCTATATTAACCATCCACAAGCTTGTGAAATTGAACCTATCATACTGCAAATCACTTACCATCCTTAAAGGTGATGTCCATTTAAGATCCCTCAGTAATCTTTCTCTTAGTGAATGCTCAAAGCTCAAGCAATTCTCAGTGACATCAGAGAATATGAAGAACTTAAGTTTGAAAGGCACATCCATCAATGAATTGCCTTTGTCCATGAGGCTTCTAAACAAACTTGAAACATTATACTTAGATGGTTGTCAAAATCTGAAGAATCTTCCAAACAAGTTCTCTAACCTCAGTTCTCTCAGAGAACTTCGAATCATCGGCTGCACGCAGCTTGATGCATCGAATCTACACTTCCTTCTTGAAGGGTCTTTGCTCCTAGAAACATTGTTGCTGCAAAATTGTCGTAATTTATTTGAACTTCCCGAAAATATTAGATTCTTATACTCATTGAAGCATCTATCATTACATGAATCTGATATTGTGAAGTTGCCTGGAAGCATCAAGCATCTCCAACAACTTGAAAAGCTTAACTTGAGTCATTGTAGGAGGCTTCACTCTTTGCCTGAGCTTCCACCATCCATTAAAGAACTACATGCCACTAATTGCACTTCCCTGAAGAAAGTGATGATGTTTTTTTCCATGGTTTCTGATCAACTGAGAGAACAAATAAGAATTCGTTCTAGATTCCAGAATTGTGTAAACTTGGATGAACATTCACTCAGAGATATAGCAATGCATTCTCATGTCAACATAAAGAGATTGGCATATGAACATTTATCAACTCTAGGAAAAAGTAACATCTTCCTAAGCGGTCCAATTGATGTTATTTACCCGGGAAGCAATGTTCCAGACTGGTTCGTGAACAGAACAAGGCAATCTTCAGTAACTATGGACTTATCTTCTGCTCTGCCTTCCGTGTTTGTGGGTTTCATATTTTGTGCGGTTGTTTCTAGGTTTCCTTCGAATGACAAGAACTTTGTTGGATGTGATTGCTACTTGGAAATAAATGGTGTAAGGGACATGAATATGGGTGCTTGGACTAGCATAAATACTTGTGAATTTATGTGTGATCATGTGTGTATATGGTATGATGAACGATGTTGTATGAAAACAAATGAAGGCATGGAAGCTGATGAAAGCAATAATATGAAGATATTGTTTGAGTTCTTTGCTCAAAGTGGAAATACTTGGGAGAAGAAAAGGGATATTGGGATTAAAGAGTGTGGAGTCTATCCTATATATGACTCAGAATATCATACCTTCATTGAAGAATTGAAGTTGAAGTCACAACTTAGAGCGATTGAAGAGGATAAAGAAGAGGAAGAGGCAATCCATTTAGCACAAAAACCCAATCAACATATCATTACACCACAAACAAGTAAAACTTGGGAGAGAACGACGCAGGGCTTGAAAGATCTCATCAACCTATGA 3258 0.3711 MAISSKFSAIKHEVYISFRGTDTRHGFLSHLRKELRRKQIEAYADDRLERGDKISQALLRAIKESLISLLIFSTDYASSRLCLEELVQILECMENQKQIVIPVFYNTDPSHVRHQKGSYGDALAKHDEYYKEKVPIWRSALNKAANLSGFHYSSNYEDEAEFIEKIAKTLSTRLNLMYKSDFRDLVGIDERIADLESLMDQRSKDVRVIGIWGMGGIGKTTIAAVVFNQFSSEFEGHCFLANVREESKNRGIIHLKNRMFSILLNENDLHIGTPNGIPTHVKRRLLRKRVLVVLDDISDSDQLENLLGAFNCFGLGSRIIITTRDKQVLGKNVDEIYEVKPLIFDYAFQLFMLNAFENNDVDLEWIVLSRKVISYAKGIPLALKVLGSFLYGKSREEWESQLEKLKKMPHAKIQDVMRLSYDDLDGEENNIFLYIAXIVREESIDNPGKRSRLWDANDISQVLEYNTGTKTILSLSLNVAKIESLCLTPQVFSKMTELKLLKFSQYDFHEQILHLPQGLDSLPNELRFFEWVCYPLKSLPSSFCPKSLVELKMIFSRVEKLWDGVLDLVNLKKIDLSNSKHLLELPDFSMAKNLEEVELSNCKSMRNVHPSILTIHKLVKLNLSYCKSLTILKGDVHLRSLSNLSLSECSKLKQFSVTSENMKNLSLKGTSINELPLSMRLLNKLETLYLDGCQNLKNLPNKFSNLSSLRELRIIGCTQLDASNLHFLLEGSLLLETLLLQNCRNLFELPENIRFLYSLKHLSLHESDIVKLPGSIKHLQQLEKLNLSHCRRLHSLPELPPSIKELHATNCTSLKKVMMFFSMVSDQLREQIRIRSRFQNCVNLDEHSLRDIAMHSHVNIKRLAYEHLSTLGKSNIFLSGPIDVIYPGSNVPDWFVNRTRQSSVTMDLSSALPSVFVGFIFCAVVSRFPSNDKNFVGCDCYLEINGVRDMNMGAWTSINTCEFMCDHVCIWYDERCCMKTNEGMEADESNNMKILFEFFAQSGNTWEKKRDIGIKECGVYPIYDSEYHTFIEELKLKSQLRAIEEDKEEEEAIHLAQKPNQHIITPQTSKTWERTTQGLKDLINL 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2240 1085 Gene3D - 7 175 IPR035897 -
Alju01g2240 1085 Gene3D - 344 425 IPR042197 -
Alju01g2240 1085 PRINTS Disease resistance protein signature 777 793 - -
Alju01g2240 1085 PRINTS Disease resistance protein signature 376 390 - -
Alju01g2240 1085 PRINTS Disease resistance protein signature 208 223 - -
Alju01g2240 1085 PRINTS Disease resistance protein signature 284 298 - -
Alju01g2240 1085 SMART till_3 11 147 IPR000157 GO:0007165
Alju01g2240 1085 Pfam C-JID domain 886 1026 IPR045344 -
Alju01g2240 1085 ProSiteProfiles TIR domain profile. 10 174 IPR000157 GO:0007165
Alju01g2240 1085 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 150 IPR035897 -
Alju01g2240 1085 Pfam TIR domain 11 188 IPR000157 GO:0007165
Alju01g2240 1085 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 176 - -
Alju01g2240 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 435 IPR027417 -
Alju01g2240 1085 Gene3D Ribonuclease Inhibitor 661 853 IPR032675 -
Alju01g2240 1085 Gene3D Ribonuclease Inhibitor 442 660 IPR032675 -
Alju01g2240 1085 Pfam NB-ARC domain 196 414 IPR002182 GO:0043531
Alju01g2240 1085 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 656 IPR044974 GO:0006952
Alju01g2240 1085 Coils Coil 1033 1053 - -
Alju01g2240 1085 SUPERFAMILY L domain-like 487 859 - -
Alju01g2240 1085 Gene3D - 176 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2240 Alju-ChrAlju01 19735050 19738823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2240 186 1053 WRKY Transcription Factor Family AT5G45050 27.547 7.10e-71 256