Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2231 ATGTATGCTCCAACATTAGCGATCCCTGTAGTAATCTTTCTCTCGTTTCTCTTCATCCTAACACTTCGTCGGAAACAAAGCAGAGATGGCCGGAATCGGAGACAGCAACCACCAGGTCCACCGGCCCTGCCCATCATCGGTAACCTCCACTTGTTCGGTCAACTCCCCCACCGCGACCTGCAATCCTTGGCCACAAGATACGGACCCATCATGTCCTTTAGGTTAGGACAAGTACCAGCGGTGATAATTTCCTCGTCGAAAGCTGCCGAATCGTTGCTCAAGACAAACGACGTCGTTTTCGCCAGCCGTCCGAGGCTTCAAGCCAGCGACATCGTTACTTATGGATCCAAGGGCATGGTGTTTTGCGAGTATGGCCCTTATTGGAGGAACATGAGGAAATTGTGTACCTTGCATCTTCTCAGTGCGTCAAAAGTGGAGTCTTTCGCTCCTCTGAGGAGGGAAGAGGTGAAGGCGGTTGTGCAGTCAATTGAGGAAGCTGCGGCGGCGCGTGAGGTTGTGGACGTTAGCCAGGTGGTGTCAGGGCTTGTAGAGAATATTAGCTATAAGATGATATTGGGTTGTAACAAGGATGACCAACTTGATTTGAAGGGGCATATTAATGAAGGAACGAGGCTAACGGGAGCTTTTAATCTGGCAGATTTCGTGCCTTGGCTTGGGCAATTTGATCTTCAGGGACTAAAACGAGCCATCACAAAAACCAGCAAAGCATTTGACGTAATACTAGAGAAGATAGTTACAGAGCATGAAGATGCTACAAGCTCACCAAAGGACCGACAAGACTTCATAGACATTATGCTTTCATTGATGCACCACACTGTCGACGGACAAAACTATGGCATTGAACGAACTAACATCAAGGCTATTGTGTTAGACATGATTGCTGGATCATTAGAAACTTCTACGGCTATCATTCTGTGGGCCTTATCTGCACTAATAAAGCTTCCAAGGGTTATGAAAATCCTACAAGAAGAGATAGAAACTGTGGTTGGAAGGAACAAGGTGGTGGAAGAGACAGACTTAGCAAAGCTTCATTATTTGGATATGGTGATCAAGGAGACCTTGAGACTGTACCCTGCCGGATCATTGCTTCCTCGAGTGTCAGCAGAGGATACAGTTGTTGATGGTTACTACATGAAGAAGAACACTCGAATTATAATCAATTTGTGGGCAATAGGACGAGATCCTAAGGTTTGGTTTAATGCTGAAGATTTCTGTCCAGAGAGGTTTGCTGACAAGAATGTTGACTATCGAGGACTTGACTTTGAATTCATACCATTTGGATCGGGTCGCAGAGGATGTCCTGGAATTCACTTGGGCTTGATTACAGTTAAATTCGTTGTAGCTCAATTGGTTCATTGCTTTAGTTGGGAGCTCCCATGGGGACAGGATCCGAATGACTTGGACATGAGTGAGAAATTTGGCTTGTCACTCCCAAGATCCAAGAACTTGTGTGCTGTGCCAACTTCTCGTATTAAGTCCAATTAA 1506 0.4588 MYAPTLAIPVVIFLSFLFILTLRRKQSRDGRNRRQQPPGPPALPIIGNLHLFGQLPHRDLQSLATRYGPIMSFRLGQVPAVIISSSKAAESLLKTNDVVFASRPRLQASDIVTYGSKGMVFCEYGPYWRNMRKLCTLHLLSASKVESFAPLRREEVKAVVQSIEEAAAAREVVDVSQVVSGLVENISYKMILGCNKDDQLDLKGHINEGTRLTGAFNLADFVPWLGQFDLQGLKRAITKTSKAFDVILEKIVTEHEDATSSPKDRQDFIDIMLSLMHHTVDGQNYGIERTNIKAIVLDMIAGSLETSTAIILWALSALIKLPRVMKILQEEIETVVGRNKVVEETDLAKLHYLDMVIKETLRLYPAGSLLPRVSAEDTVVDGYYMKKNTRIIINLWAIGRDPKVWFNAEDFCPERFADKNVDYRGLDFEFIPFGSGRRGCPGIHLGLITVKFVVAQLVHCFSWELPWGQDPNDLDMSEKFGLSLPRSKNLCAVPTSRIKSN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2231 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Alju01g2231 501 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 SUPERFAMILY Cytochrome P450 37 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PANTHER CYTOCHROME P450 93A3-LIKE 12 499 - -
Alju01g2231 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 FunFam Cytochrome P450 83B1 23 493 - -
Alju01g2231 501 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 Gene3D Cytochrome P450 21 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju01g2231 501 CDD CYP71-like 66 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2231 Alju-ChrAlju01 19436469 19438564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2231 44 498 Monolignol Biosynthesis Gene Families AT4G36220 38.994 6.13e-118 355