Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2214 ATGGATTTAGAAGAAAAGTTCCTTGCTAAAGGGTCGCATCAATGGTCTTTTGCTGCTCATCTAGGAGTTTCGGGTCTTCAAAGCCTTTCTTCCAGTGTGCATAGCACCCCAGAGAAAAATGGCCATTCAGATGACGCTTCAAGAAGTCCAGAACTCCTGCAGGAGTTCCTTAAATCTGGTCCAAAAAAGGAACTTCTACGGACATGCTTTGATAAAGACAAAAAGAACACTACAGCAAAAGGCAGGCTGACTGAAAATAAGTCAAGTAAGATAATCAAGAAACAGGACTTGAAAAAGGTTTCTAGCAGTAACCAGTCCTCTAAGAAGCAACATAGAAAGGGAGAAAATCCCACAAGACTCCTGCCAACGCCTGACCAGTCTTCAGATTTTGGGCATGCAAACTCCTGGATCTGTAAAAATTCTGCTTGTAGAGCTGTTCTGTCCATAGACGACACATTTTGTAGAAGGTGCTCTTGCTGCATCTGTCACCTGTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTCTGCACATCTGAATCTGCTCAGGGTGATTCCTGTGGGTTATCTTGCCATATCGAGTGTGCCATCCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAATTGATGCAACTAGATGGTGGCTATTGCTGTGCAACTTGTGGTAAAGTTACAGGGATACTCGGATGTTGGAGAAAGCAGTTAAGTATAGCAAAAGATGCTCGACGTGTAGATGTACTCTGTTATAGAATATATTTGAGCTACAGGCTTCTAGATGGGACTTCGAGGTTTAAAGAACTCCATGAGATCGTGCAAGAGGCGAAGGCTAAATTGGAAACAGAAGTTGGCCCGGTTAATGGTGTTTCTGCCAAGATGGCAAGGGGCATTGTCAGCAGACTCTCTATTGCCAGTGATGTGCAGAAATTGTGCTCCCTTGCTGTTGAGAAAGCTGATGAGTGGCTGGCCTCTGTTTCCAATGTAAATCCAGATTCCAGAGAGGGTTCGCTCCCTGCTGCCTGCAAGTTTATTTTTGAAGAGGTGACAGCTTCCTCAGTCAAAATCATTTTGATTGAAATGTCTAATTCATCTTCTGAGGACATCAAAGGTTTCAAGCTCTGGTATTACAGGAGTGGCGAGGAATTGCACACTAGAGACCCTGTTTGTGTTTTCCCAAAATCTCAGAGGAGGATTCTGATATCAAACCTCCAACCTTGCACAGAATATACATTTAGGATTGTGTCTTACACAGATACATGTGATCGGGGTCATTCTGAGGCCAAGTGTTTCACTAAGAGCATTGAAATAATTAGAAAAAATCCTTCTTCGTTAGCTGCTCTGAATCATAAAGAGAACCATAACACTGGAGGCACTTCTTCTGACCCTAAAAGGGAGTCTAATCCAACAATGGAAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAGTTCTGCGCCTCGCCTGGGCTCAAGAACAAGGTTGCTTTGAGGGGTTTTGCTGTGCTGATGTGAAAAATTGCTGTGGAGGAAGTGAAATGGTCAGGCCTAAATATTCAGAAGAGGCATTGCCTAAAGTTTCAAGAGGCCTTGATCTAAATGTAGTTTCAGTTCCTGATTTAAATGAAGAATTAACACCACCTTTTGAGTCTTCTAGGGATGAAGATAACGGTTGCACCTTGCAGCAGGTTATTGGGGCTGATGATGATGCTGCTTCTCATGATATTGAGAAGATTGGCATAGCAAGATCCCATGGCAGTGGTGACTCACAAACCTGGGCCCACAGGCCTGCCGGAGAAGTCCCGGCCGTTGACTCACGTGTAGATGCTGCAAGCAGGAAAAGAGCAGCAAGCACGAATGAAGAGACTCATGATTGTGACAGCACTTTGATAAATGGATCTCCTTTACGCATTTCTGACGCATCCTGTTCCTTGGATGAGAACTTCGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGTGAGGGCCACATTAAGCAGGAATTTCGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACAGAACAGGAACGTAGGGTGGTCAATACCTATATTCAAACTCTGATTGATGACCCAAGTAGTTTGGCTGGACAACTGGTTGACTCTTTTTCTGATATCATATCTAACAAGAGGCCAAGAAATGGATTCTGTGGTAAGCTTTGGCATTAA 2187 0.4353 MDLEEKFLAKGSHQWSFAAHLGVSGLQSLSSSVHSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDKKNTTAKGRLTENKSSKIIKKQDLKKVSSSNQSSKKQHRKGENPTRLLPTPDQSSDFGHANSWICKNSACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESAQGDSCGLSCHIECAIQHEKVGVVDHGQLMQLDGGYCCATCGKVTGILGCWRKQLSIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSIASDVQKLCSLAVEKADEWLASVSNVNPDSREGSLPAACKFIFEEVTASSVKIILIEMSNSSSEDIKGFKLWYYRSGEELHTRDPVCVFPKSQRRILISNLQPCTEYTFRIVSYTDTCDRGHSEAKCFTKSIEIIRKNPSSLAALNHKENHNTGGTSSDPKRESNPTMEDSGFKVRDLGKVLRLAWAQEQGCFEGFCCADVKNCCGGSEMVRPKYSEEALPKVSRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQVIGADDDAASHDIEKIGIARSHGSGDSQTWAHRPAGEVPAVDSRVDAASRKRAASTNEETHDCDSTLINGSPLRISDASCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCGKLWH 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2214 728 Pfam PHD - plant homeodomain finger protein 138 256 IPR032881 -
Alju01g2214 728 CDD FN3 342 418 IPR003961 GO:0005515
Alju01g2214 728 Gene3D Immunoglobulins 322 428 IPR013783 -
Alju01g2214 728 MobiDBLite consensus disorder prediction 27 52 - -
Alju01g2214 728 MobiDBLite consensus disorder prediction 605 620 - -
Alju01g2214 728 PANTHER VIN3-LIKE PROTEIN 2-RELATED 29 728 IPR044514 GO:0010048|GO:0040029
Alju01g2214 728 MobiDBLite consensus disorder prediction 38 52 - -
Alju01g2214 728 SUPERFAMILY Fibronectin type III 344 426 IPR036116 GO:0005515
Alju01g2214 728 ProSiteProfiles Fibronectin type-III domain profile. 337 436 IPR003961 GO:0005515
Alju01g2214 728 MobiDBLite consensus disorder prediction 581 624 - -
Alju01g2214 728 MobiDBLite consensus disorder prediction 94 127 - -
Alju01g2214 728 MobiDBLite consensus disorder prediction 447 464 - -
Alju01g2214 728 MobiDBLite consensus disorder prediction 447 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2214 Alju-ChrAlju01 19173366 19178855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2214 99 721 PHD Gene Family AT3G24440 46.792 3.85e-180 525