Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2210 ATGCTAAAAGTGGTGAGATCTCTTAATCATCACTTTTGGCCCAGGAAAAAGTTGCAGAAGTTGAACTATTTCCTCGTCTGCAGTAAAATTCAGCAACGTAATGGGGTTTTGGTAATCGTAGTGGTGGAGATGGCAAACCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTCGGGGCCTTCTGAAACTTCAAGAGAATCGTAGATGCAGTAATTGCGGCAGCCTGGGACCGCAATATGTTTGCACAAATTTTTGGACATTTGTTTGTACAAACTGTAGTGGAATACACCGGGAATTCACACATCGAGTAAAATCAATTTCGATGGCTAAATTTACTTCACAAGAAGTTAATGCACTTCAGGAAGGAGGAAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCTGATAGCAGTAATATCGACAGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAGATATAGTGGTGAGAGGACCTATGACAAACCACCGAGAGGAAAGATGGGTGACAAGGATGATTTCTATGAAAACAGAAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATATGAGGATGCACATGAACGTCGTTACAGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTATAGGAGAAGCCCAGGTCGTCCACCAATAATCAATGATTGGCGTCGTGAAGATAGATTTGCAGATCGAAGATCATCTGATGGAGATTATAAGCTGGAAGGCCAATCGCCTGAGCAAGCAAAGGATTTTGATTCTTCAAGTTCGCCTGTTGTACGGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTTCCTCTTCGAATAAGTGAACCCCCCAAAACAAACAGTGGAAAGCCTGCTGATGGCTCTGCACTCACACAGAGAACAGCATCTTCCAGTAGCTTAGCATCTAGTAATGGAAATGCGGCAGAAGTTAAGCTTGATACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAACCTCCTGTTGCTCCAGCAATTCCTCAAGCTCAACAAACTACTGCTGTCCAATCTGCCGTGCAGCCAGCAAATTCTAGTGATAACAACTGGGCATCTTTTGATGTTGCCCCTGCGGCTAAAACAACCCAAGGTCCTTCAAATTTAAGTCCACTTGAATCTGTTCTCTCACAACTAGCAATGCCATCACCTGCCCCTGCCCCTACACCTGCTCAGGTTTCTGGAGTTCAAGGGCCTCTGCCAGTATCAGCTGTCACTGCCACTGCTGTTGGAGCTGGAACTCTTGGCAACTTCTCATCAGTGCCACCAAGTGGTACTTCTGTAACAGCCCCTGGATTGATGACAGCACCATCAATCAGCAATGCAGGCCAGTGGCCCAGTGTGCAACACAACCAACCTGTGTTCCCTGCCACTGGTAGTCATCCTACTACTCAACAATTCATTCCATCAGCAGGTGTATCTTTGAATAGTCAGCAGTGGAGTGTATCTCCAGTGCCCACAATGCAAGGGCACCCTAGCATACAAATGCCACATGCATCCTCTCTTATCCCAAAACCGACCAATGAGGTTAGCTCTGGTGCTGCTTCTCTGCCGTCAAAAGAAGTGCAACCAAGTGGAAGAAAAGAACTTCCTGAGGATCTCTTCGCTGCAAGGTATTCATCCTTCACTTCTCCTGCTCCAGGGTGGCAAATGGGTCCTCCTCATGGCATGGGTATCTATATGCAATATAATACTGCAGCGCACATGCCAAGTTTTCCACAGTCATCAAAATCAACAAATCCATTTGATGTCAGCAGCGAACCACCTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCCATGCAAGGTGCTCTGCCAAGTATACCACCTTCTTCAGGTTTAATACACCCCCCAAGCGTGGGTAATCCTTCACTTTCCTGGCGCTCACCCCAGTCATCATATGGTTCAGTACTTCCTCCACAAGCTCAAGTTCATGCACCAGCAATGGCGCCAAGGGCATACGTGGGGCAACAAGTGCCGACTAACATGCCAATGCCTAGGCATCAAGAAATTGGGAATTATGGCACACGGGGAGCTTCTTTTGGCATCTCAAATCCAGATCAGCAGATAACTGGTTTGTTCTCAACAGCTGCTGCGGGAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGGTGA 2235 0.4595 MLKVVRSLNHHFWPRKKLQKLNYFLVCSKIQQRNGVLVIVVVEMANRLKEDEKNERIIRGLLKLQENRRCSNCGSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVNALQEGGNQRAKEIYFKEWDPQRHSLPDSSNIDRLRDFIKHVYVDRRYSGERTYDKPPRGKMGDKDDFYENRRVEAYQGGSKSPPYEDAHERRYSDRSSPGGRSPGYDQESRQYGDYRRSPGRPPIINDWRREDRFADRRSSDGDYKLEGQSPEQAKDFDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKPADGSALTQRTASSSSLASSNGNAAEVKLDTTKSLIDFDAEPEPPVAPAIPQAQQTTAVQSAVQPANSSDNNWASFDVAPAAKTTQGPSNLSPLESVLSQLAMPSPAPAPTPAQVSGVQGPLPVSAVTATAVGAGTLGNFSSVPPSGTSVTAPGLMTAPSISNAGQWPSVQHNQPVFPATGSHPTTQQFIPSAGVSLNSQQWSVSPVPTMQGHPSIQMPHASSLIPKPTNEVSSGAASLPSKEVQPSGRKELPEDLFAARYSSFTSPAPGWQMGPPHGMGIYMQYNTAAHMPSFPQSSKSTNPFDVSSEPPPVQAPTFPSMSSMQGALPSIPPSSGLIHPPSVGNPSLSWRSPQSSYGSVLPPQAQVHAPAMAPRAYVGQQVPTNMPMPRHQEIGNYGTRGASFGISNPDQQITGLFSTAAAGNSFSAGGNPFG 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2210 744 Pfam Putative GTPase activating protein for Arf 56 166 IPR001164 GO:0005096
Alju01g2210 744 MobiDBLite consensus disorder prediction 360 384 - -
Alju01g2210 744 MobiDBLite consensus disorder prediction 514 551 - -
Alju01g2210 744 MobiDBLite consensus disorder prediction 192 335 - -
Alju01g2210 744 MobiDBLite consensus disorder prediction 348 384 - -
Alju01g2210 744 MobiDBLite consensus disorder prediction 242 271 - -
Alju01g2210 744 Gene3D Arf GTPase activating protein 44 173 IPR038508 -
Alju01g2210 744 MobiDBLite consensus disorder prediction 514 559 - -
Alju01g2210 744 FunFam Arf-GAP domain and FG repeat-containing protein 1 44 178 - -
Alju01g2210 744 PANTHER ARFGAP/RECO-RELATED 44 744 IPR044820 GO:0005096
Alju01g2210 744 ProSiteProfiles ARF GTPase-activating proteins domain profile. 55 173 IPR001164 GO:0005096
Alju01g2210 744 MobiDBLite consensus disorder prediction 603 618 - -
Alju01g2210 744 MobiDBLite consensus disorder prediction 167 186 - -
Alju01g2210 744 SMART arf_gap_3 55 173 IPR001164 GO:0005096
Alju01g2210 744 MobiDBLite consensus disorder prediction 603 633 - -
Alju01g2210 744 SUPERFAMILY ArfGap/RecO-like zinc finger 54 166 IPR037278 -
Alju01g2210 744 CDD ArfGap_AGFG 55 165 - -
Alju01g2210 744 PRINTS HIV Rev interacting protein signature 67 86 IPR001164 GO:0005096
Alju01g2210 744 PRINTS HIV Rev interacting protein signature 104 125 IPR001164 GO:0005096
Alju01g2210 744 PRINTS HIV Rev interacting protein signature 86 103 IPR001164 GO:0005096
Alju01g2210 744 MobiDBLite consensus disorder prediction 311 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2210 Alju-ChrAlju01 19122151 19129782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2210 55 165 C2H2 Transcription Factor Family AT4G21160 33.333 3.60e-13 69.7