Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2191 ATGGAGCAGAACGACGAGATCGCGCCGTTCGTCATAAAGACGTACCACATAGTCAACGATCCCAGGAGCGATAATCTCGTCGCCTGGGGACCTGCCAATAACAGCTTCATCGTCCTCGACCCTCTGGATTTCTCTCGCTGCGTCTTACCTGCCTATTTCAAACACAACAACTTCTCCAGCTTCGTTCGTCAGCTCAATACCTATGGTTTCAAAAAGGTGGATCCAGATCGATGGGAGTTTGCGAACGAGTGGTTCCTGCGGGGGCAGAAGCAGCTGCTGGTGAACATAGTGAGGAAGAAGCAGAGCAAGAATAAGAACCTTATGTGCTATTATGAGGGGTTGGAGGAATTGGATGAGGAAGTGTTAGTGATGGAGATAGCGAGGTTGAAGGAGGAGCAGAAGGCGTTGGATAGGGAGGTGGAAGGGATGAATAAGAGGTTGGAGGCGACGGAGAGACGACCTCAGAAAATGATGGCGTTTCTGTGCAAAGTGGTGGAGGACCCTGACGTGTTATCACGCATATTGTCTGAGAGAGAAGAAAGACACCTGGCCGAGAAGCGTCGGCGCTTGATATCGTCAGCCACCGCTGCCACCACCTCCTCTTCGTCTTCGTCTGGCATGGCTGTCAAGACAAAGATGGAAGAAGACGAGGTGACTGTGGGAGGTTTTATGTCTTCGTCCTCGCCGGAGACTGGTTTCGAAGGTCATAATTTTTGTCGATCTTCTCCGCCGCCACAGGAATCGCCGTATTGGCGTGGCGGAATTAGCCAAGCTACACTTGATACACCGCCTTGGAGTCAGCAGAGTAATGGTGACGCCACCGCGGGAACGGCAGTGGGAACCGTGTGGGCGCCTCTAGGAGGGACGGACTCGGGATGCCACGCCGGTGACGGTCAGTTGACTTATTTTACAGATATGGCGCCGCAGACTCGGAGCAAACCGCCGCCTTATCCATTTTCGCTGTTGGAGTGGGGCTTTTAG 981 0.5311 MEQNDEIAPFVIKTYHIVNDPRSDNLVAWGPANNSFIVLDPLDFSRCVLPAYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEWFLRGQKQLLVNIVRKKQSKNKNLMCYYEGLEELDEEVLVMEIARLKEEQKALDREVEGMNKRLEATERRPQKMMAFLCKVVEDPDVLSRILSEREERHLAEKRRRLISSATAATTSSSSSSGMAVKTKMEEDEVTVGGFMSSSSPETGFEGHNFCRSSPPPQESPYWRGGISQATLDTPPWSQQSNGDATAGTAVGTVWAPLGGTDSGCHAGDGQLTYFTDMAPQTRSKPPPYPFSLLEWGF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2191 326 MobiDBLite consensus disorder prediction 226 247 - -
Alju01g2191 326 Gene3D - 2 100 IPR036388 -
Alju01g2191 326 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 226 IPR027725 -
Alju01g2191 326 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju01g2191 326 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Alju01g2191 326 Coils Coil 119 153 - -
Alju01g2191 326 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju01g2191 326 FunFam Heat stress transcription factor B-4 2 100 - -
Alju01g2191 326 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju01g2191 326 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju01g2191 326 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju01g2191 326 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2191 Alju-ChrAlju01 18920044 18921119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2191 7 198 HSF AT3G24520 59.184 6.48e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Alju01g2191 HSF_DNA-bind 1.7e-29 CL0123