Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2185 ATGAGGTTATACTTCTTAACCAAACGCTTTCCCTCTCGCACTCGTTCAATTCAATTCCTCCCCATTAAACCACTCCCTCACTTTGCGTCTCTCTGCAACTTTAACCTCTCTCGCATCATCACTGAGAGAGATTCTGCCACCATCTCCACTTCAATTACCTCTCTGATTTGCGTTTTTTCGACGCCTTCTTTTGATTACCTGACATATTCATTTGTTGCAATAATGTCAACCTCGCCGTCTCCCGGAGCTTCTCCGGTCCCCACACCGCCGCCGGCTACTAACGCAACTTCTCCTCCCCCGCCCACTACCAACACAACCTCTCCTCCCCCGCCCACTACCAACACAACCTCTCCTCCTCCGCCCTCGGCCACCCCTACTGCACCACCTCCTGCTACTCCCTCCGCTCCACCACCGGCTATTCCTTCGCCTCCGCCGCCAGCCACTCCCACTCCCACTCCTCCGTCTACCTCTCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCGCCTCCGGTGACTCGGAGCTCACCTCCTCCGCCGTCCGGTTCATCCACACCTTCGACTCCGACTCGAAGCCCGCCCCCACCGCCTTCGTCCCCTTCTTCGTCGACGACTGTACCAACTGGTGCTATTGTTGGAATCGCCGTTGGTGTTGTGGCGATTCTTGTAATTCTAATACTTGTTTGCGTATGTGGTCGGAGGAAGAAGAGGAGAACAAGTAATGCCGAATACTATGAGCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCCACCACGTCAGTGGCAACATAATGCTCCTCCTCCTTCAGATAATGTTGTCTCCGTGATGCAAAAGCCCCAACCATCGCCGCCAGGTGCATCACGACCACCCCAATTACCAGCTTATGCCGCTAAACCTCCTCCGCCACCACTATTCCTGAGCAGCAGTGGTGGGTCAGGTTCCAACTATTCAGGTGGCGAAAATCCACACCGACCCCCTTCTCCTGGCATTCAATTGGGTTTCTCAAAGAGCACATTTACATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAAAGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTGAAGGCTGGAAGTGGGCAGGGAGAACGAGAATTTCAAGCAGAAATTGAGATCATTAGCCGAGTTCATCACAGACATCTTGTTTCTCTGGTTGGATACTGTATCACTGGACACCAGAGATTGCTTGTTTATGAATTTGTTCCGAACAATACGTTGGAATTTCACTTGCATGGAAAAGGGCGACCAACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAATCTGCCAATATCCTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGGCTAGCAAAGTTTTCTTCTGATGTCAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCCTTTGGGGTCATGCTTCTGGAGCTAATTACTGGACGTCGACCAGTTGACAAAACTCATACTTTCATGGATGATAGTCTGGTAGAATGGGCAAGGCCTTTGCTTATCCGTGCTTTAGAAGAGCATGATTTTGATTCTGTTGTTGATCCAAGGCTCAAAGATGAATATGACGTCAATGAAATGACTCGCATGGTTGCTTGCGGTGCAGCCTGCACCCGCCATTCAGCACGTCATAGACCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGAGACATGTCTCTCTCAGATCTGAACGAAGGAATTAAACCTGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTACGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGACTTTGGGAACCCAGGAGCTTGGCGTCAGCAATGATTACAGTGCACTTACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCTCCAGGCCACCCGAGAAATGGAAATGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 2178 0.4977 MRLYFLTKRFPSRTRSIQFLPIKPLPHFASLCNFNLSRIITERDSATISTSITSLICVFSTPSFDYLTYSFVAIMSTSPSPGASPVPTPPPATNATSPPPPTTNTTSPPPPTTNTTSPPPPSATPTAPPPATPSAPPPAIPSPPPPATPTPTPPSTSPPPPTSGTNSPPPPVTRSSPPPPSGSSTPSTPTRSPPPPPSSPSSSTTVPTGAIVGIAVGVVAILVILILVCVCGRRKKRRTSNAEYYEPPQGPKGDQYGGPPRQWQHNAPPPSDNVVSVMQKPQPSPPGASRPPQLPAYAAKPPPPPLFLSSSGGSGSNYSGGENPHRPPSPGIQLGFSKSTFTYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEIEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDKTHTFMDDSLVEWARPLLIRALEEHDFDSVVDPRLKDEYDVNEMTRMVACGAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMTLGTQELGVSNDYSALTSDNSLYPSGSSSEGQSLQATREMEMRKMNNHQGYSGSS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2185 725 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Alju01g2185 725 Pfam Protein tyrosine and serine/threonine kinase 358 625 IPR001245 GO:0004672|GO:0006468
Alju01g2185 725 MobiDBLite consensus disorder prediction 78 205 - -
Alju01g2185 725 Gene3D Transferase(Phosphotransferase) domain 1 429 637 - -
Alju01g2185 725 FunFam proline-rich receptor-like protein kinase PERK1 331 428 - -
Alju01g2185 725 FunFam Proline-rich receptor-like protein kinase PERK1 429 637 - -
Alju01g2185 725 MobiDBLite consensus disorder prediction 236 335 - -
Alju01g2185 725 PRINTS Proline rich extensin signature 77 89 - -
Alju01g2185 725 PRINTS Proline rich extensin signature 118 130 - -
Alju01g2185 725 PRINTS Proline rich extensin signature 94 110 - -
Alju01g2185 725 PRINTS Proline rich extensin signature 133 154 - -
Alju01g2185 725 MobiDBLite consensus disorder prediction 309 323 - -
Alju01g2185 725 MobiDBLite consensus disorder prediction 284 308 - -
Alju01g2185 725 ProSiteProfiles Protein kinase domain profile. 353 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2185 725 MobiDBLite consensus disorder prediction 82 202 - -
Alju01g2185 725 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 215 685 IPR047117 -
Alju01g2185 725 Gene3D Phosphorylase Kinase; domain 1 332 428 - -
Alju01g2185 725 SUPERFAMILY Protein kinase-like (PK-like) 327 626 IPR011009 -
Alju01g2185 725 SMART serkin_6 353 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2185 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Alju01g2185 725 MobiDBLite consensus disorder prediction 267 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2185 Alju-ChrAlju01 18777665 18781623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2185 155 708 Trihelix Transcription Factor Family AT1G70460 50.268 4.13e-167 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju01g2185 PK_Tyr_Ser-Thr 1.3e-44 CL0016