Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2172 ATGCTCGATGGTCTCCTCATTCTCCTAGACAGCTACTCTCTTCTTCATTGCTCTGTCGTTGATGATCAACAAGGAACATCTCCTATCCCTGGTCCAAGACAGAGTCTTCCTGAAAAGCTAGTATTTAATAAAGTCTTGAGGGAGCTAAAGGGAGAGACAAAGGAAAGAGGGATAGCATTCAACAAAGTATCTGGGATGTATGCGTTTGAGTATCCAAGTAAGGATGGGAGGTTCAATGATGCTTTAAACAATCCAATGCTTGATTTGACTATTGTGATAATGACCAACATTCTTAAATTCTATGATGGATTTGAAGCACTTGACATAGTTGTAGATGTTGGAGGCGCCACGCAGATGATGACAGAGCAACATGTAAATGCTTATATGGCCAAGCCTACCAATACCATTGTGGGGAACTGGGAAGTGCTTGCCAGAACGCAGTCATTGCGTAACCTTTTGCAGGTGAGGAATTGGACGGATGAGATCGGACGATATAGAGCCTCCTGTGACTCGCATCATCTGTTCCGTGCTCACATTCAGCCCCAGCAAATCACGGTCCCAAGTTTCTGA 570 0.4421 MLDGLLILLDSYSLLHCSVVDDQQGTSPIPGPRQSLPEKLVFNKVLRELKGETKERGIAFNKVSGMYAFEYPSKDGRFNDALNNPMLDLTIVIMTNILKFYDGFEALDIVVDVGGATQMMTEQHVNAYMAKPTNTIVGNWEVLARTQSLRNLLQVRNWTDEIGRYRASCDSHHLFRAHIQPQQITVPSF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2172 189 Gene3D - 1 97 IPR036388 -
Alju01g2172 189 Pfam O-methyltransferase domain 52 128 IPR001077 GO:0008171
Alju01g2172 189 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 117 IPR029063 -
Alju01g2172 189 Gene3D Vaccinia Virus protein VP39 79 126 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2172 Alju-ChrAlju01 18687732 18694268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2172 1 128 Monolignol Biosynthesis Gene Families AT5G54160 38.095 8.46e-16 72.4