Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2161 ATGAATAGAGGTCATCTTCTTCAGCAGAGCTCACCAGTTCAACAAATGATGGCGAACCCTAACTGGTGGAACATCAATAATATTAACACCATGCGTAGTCCTCAACAACCTTCTCCTTTCTTATCCTCATCTCCCCCCAATTTTCAACAGCTTCCTTCTTGGCAACATCATGACCTCAATAATCAACAACCCCTTCCAGACTCTTGGACCCAACTTCTCATGGGTGGATTGGTGGGTGAAGAAGAAAGAGGAGGTATGGGTCAGTTTCTTCAGGCACCGAATATTAATGCTGCTTTGGTGGATATTAAGCAAGAAAGTTCAGTGAATAGCTATGGTTATGCACATGGAAGCAGCAATGAAGAATTTCAGGCAATAAAACCTACTGGTTGGCCTCAAATGGTTGTTCCAGCTTCTTCCCCAAAGTCCTGTGTCACTAGTTTTAGCAGCAATATGTTGGATTTCTCTAACAATCACACTGATGCTAAGCCTTCTCTTCCAGATCCATCTTCTGAGTGCAACAGCAGTGCAAGTGGTGGGGCAGTGAAGAAGGCTAGGGTTCAACCTTCTGGAGCTCATCAATCTACCTTCAAGGTTAGGAAGGAGAAGCTGGGTGACAGAATCACAGCCCTTCATCAGCTAGTTTCTCCATTTGGGAAGACTGACACAGCGTCTGTGCTGTTAGAGGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATCGAGGCTCTTAGCTTACCATACTTGGGCAATACCAGTACATCATCTAACATCAGGCACCACCAACAATCTGCAGTTCAAGGAGAGAACAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATAATAATGAAAATAGCTTGAAGAGGAAAGCCGCTGGTAGTAATCCACAGGAATCAAGAGAAGAAGGGAAGAAGGACCTGAGAAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACAATGCAAGTTGGGAGTGATAATGGGGCAGACTATTGGGCTCCTGCACTGGGCGCTGGGTTTCGATAG 1029 0.4529 MNRGHLLQQSSPVQQMMANPNWWNINNINTMRSPQQPSPFLSSSPPNFQQLPSWQHHDLNNQQPLPDSWTQLLMGGLVGEEERGGMGQFLQAPNINAALVDIKQESSVNSYGYAHGSSNEEFQAIKPTGWPQMVVPASSPKSCVTSFSSNMLDFSNNHTDAKPSLPDPSSECNSSASGGAVKKARVQPSGAHQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTSTSSNIRHHQQSAVQGENNCIFPEDPGQLLNNNENSLKRKAAGSNPQESREEGKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPALGAGFR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2161 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 236 IPR011598 GO:0046983
Alju01g2161 342 MobiDBLite consensus disorder prediction 155 177 - -
Alju01g2161 342 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 324 - -
Alju01g2161 342 CDD bHLH_AtbHLH_like 192 244 IPR045239 -
Alju01g2161 342 Gene3D - 185 250 IPR036638 GO:0046983
Alju01g2161 342 MobiDBLite consensus disorder prediction 155 196 - -
Alju01g2161 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 197 247 IPR036638 GO:0046983
Alju01g2161 342 FunFam transcription factor bHLH68 isoform X1 194 247 - -
Alju01g2161 342 MobiDBLite consensus disorder prediction 289 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2161 Alju-ChrAlju01 18578476 18582377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2161 1 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.162 3.42e-54 179