Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2155 ATGGAACGGATTGTAGGCGGCAAGTATAAGCTTGGCCGCAAGATCGGAAGCGGATCCTTCGGTGAAATTTATCTGGCTACTCATATTGATACTTTTGAGATCGTCGCCGTCAAGATCGAGAATAGTAAAACAAAGCATCCGCAGTTGCTTTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGTATTCCTAGCATAAAATGGTCTGGCGTTGATGGGGAGGAGAATGTACTTGTTCTTGATTTGCTGGGACCGAGTCTTGAAGATCTGTTTGTGTATTGTGGAAGAAAGTTTTCATTGAAGACAGTCTTAATGCTGGCTGATCAAATGATCACTAGAATAGAATATGTGCACTCGAAGGGATTTTTACACAGGGATATAAAACCCGATAACTTTCTCATGGGGCTTGGTCGGAAGGCTAACCAGGTTTACATAATTGATTTTGGTCTTGCGAAAAGGTATCGGGACTCCACCACCAATCGCCATATCCCTTATAGGGAGAACAAAAATTTAACAGGGACTGCACGTTATGCAAGCTGCAATACTCATCTTGGGATCGAACAAAGCCGACGGGATGACTTGGAGTCACTGGGCTATGTTCTTCTGTACTTCCTGAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAATTGTCAACTCCCATTGAGGTCCTCTGCAAATCCCATCCTGTAGAGTTTGCTTCATACTTCCACTACTGCCACTCTCTGACTTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGCGTATTTCGGGAACTATTTACTAGAGAAGGTTATGAATTTGACTACGTATTTGATTGGACCATCTTGAAGTATCAGCAAGCACAAAAGAACAAATCTCAGCCGCGCATACCTCCTGTTACTGTAGCAAGCAACAGTCGTGCAATGCCAATGGATGTTGACAACCATCATGGTGATGTATCAGATCGCATTCGATCAGGCAATGCTATTATTCAGAACATCCTTTTAAGAAGAATATTTTTGGAGAGGAGAATATGCCCTCTACTTCATATTCGCTTTCTGGTACCTCCAAAAGGGACTCCTCGAAGCCCATCATACCAGCCGAAGCTTCTAATTCTGGACATGAACATGTTGGTAAAATTGGGCCTTCTAGTAGCTGGATTTCATCTCTGCATCGCACCAAATGAAATATCAATATGCTGTGAATCTGTTCAAGAAAAGTCTCATGCATATGTGAAGCTGCAAATGTGTGGTGGTTCACTTGCCTCTTTTTCTGTGTATTTGATCGAGAATATCCCAGTGATTTGTTAA 1341 0.4236 MERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYEFDYVFDWTILKYQQAQKNKSQPRIPPVTVASNSRAMPMDVDNHHGDVSDRIRSGNAIIQNILLRRIFLERRICPLLHIRFLVPPKGTPRSPSYQPKLLILDMNMLVKLGLLVAGFHLCIAPNEISICCESVQEKSHAYVKLQMCGGSLASFSVYLIENIPVIC 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2155 446 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2155 446 CDD STKc_CK1_delta_epsilon 8 282 - -
Alju01g2155 446 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Alju01g2155 446 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2155 446 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Alju01g2155 446 FunFam Casein kinase I isoform delta-like 1 339 - -
Alju01g2155 446 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Alju01g2155 446 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2155 446 PANTHER CASEIN KINASE-RELATED 7 305 - -
Alju01g2155 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2155 Alju-ChrAlju01 18453306 18457190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2155 9 215 EF-hand Containing Proteins AT4G23650 29.577 8.27e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Alju01g2155 Pkinase 6e-28 CL0016