Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2151 ATGGGTTGTGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGCAGTCCAAGAAATTCCAGGATAAATGAAGGTCGAAATGCGAGAACTGGTGATACTGCCTGGTTGTCTCCTGCGTCCTCGGATGTTCAGGAAGGTGAGGATAGAGACCAATTGAATCAATTGAGCTTAACCAGAGACTCTGAAGCAGGCATCAGAAGGCTAGCTAGGGTTTCAGCGCAGTTCCTACCTCCCGATGGCTCACGAGCAGTGAAGATCCCTTCTGGGAACTTTGAATTGCGTTACTCGTACTTGTCACAGAGAGGTTATTACCCTGATGCTCTAGACAAAGCCAACCAAGACAGTTTTTGCATTCACACCCCGTTTGGCACAAACACTGATGATAATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGGCTCAGTGTTCGCAATTCGTGAAGAGAAAGCTATGTGAGAATTTGCTTAGAAACAGTAAATTTCGGGTAGATGCTGTGGAGGCTTGTCACGCTGCGTTTTTGGCGACAAACTCGCAGCTGCATGCTGATTTTTTGGATGATAGCATGAGCGGTACTACAGCAATTACGGTTTTGGTTCGGGGTAAGACTATATACGTAGCCAATTCAGGTGATTCTAGGGCGGTGATTGCAGAGAGGAGAGGAAACGATATTGTGGCAGTAGACTTATCCATGGATCAAACACCTTTTAGGCCAGACGAACTTGAACGGGTTAAACTTTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGGCTTAAGAATCCTGATGTTCAATGTTGGGGCACAGAAGAAGGAGATGATGGCGACCCGCCTAGATTGTGGGTGCCGAACGGGATGTACCCTGGCACAGCTTTCACTAGAAGCATTGGTGATTCAATTGCCGAGACCATTGGCGTCGTTGCTACCCCTGAAATTGTTGTTTTCGAGCTCACACCAAACCATCCTTTCTTTGTGCTCGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGCCAGACTGTGGTTGAAATGGTTGCTAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGACTTTGGCTACAGTATGAAACTCGTACAGATGATATTACCATTATTGTTGTTCATATTAATGGACTAACCGATCCTGCTGGTGGTCTATCTGCCAGTTATGGTGATATTGTTAGAACTCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCACCTTCCACCCTAAGCTGGAACTCCAAGAACCCTCGGGTAAGGCATGACTTGTCAAGGGCGCGTATCCGAGCAATTGAAAATTCCTTAGAAAATGGGCAAACTTGGGTTCCTCCATCTTCAGCTCATAGGAAAACATGGGAGGAAGAAGCACAAATTGAGCGGGCATTGCATGATCATTTTCTCTTCAGAAAGCTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAACCAAATGGAGAAGTGCCTAGGGTTTTGCAACGCTACACAGCAGACAAGTTGTCTTGTTTTGGAGAACTTGCTCTAATGTACAATAAACCACTTCAGGCCTCTGTACGAGCTGTAACAGATGGAACTTTGTGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTCTAATGTCAAAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCTGTAGATCTCTTTTCAAAGTTGACAATCTTACAACTCAGTCAGATCTCAGAGTCCCTTTCTGAAGTTTCCTTCTCAAATGGTCAAACAATAATTGATCAAAATGAAGCCGCTGCATTGTACATAATCCAGAAAGGACAAGTGAGAATAACTTTCGATTCAGATTTACTGAGAAACCCGAATGCCTCCAGCCTGAAGCCTGACAATCAAAATGAGAATGATGATCAACAGAGCATGAAGGAGCTATCAATAGAGAAGCCTGAGGGAAGTTATTTTGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACGTTCAGGGCTGTTGCAGTGGGTGATGTGTTATGTACTGTATTAACAAAAGAAAAATTTGAATCAGAAATTGGCCCCTTAAAAACGTTTTCTCTGGAAGATCAGAAGTCAAGGGACAATTCCTCTGACTATTTGAAGGAATCAACTAAAAGTCTTAATTTTTCTTCCCTTGATAAAATCCATGTCTCAGATTTGGAGTGGAAAAAGATTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTACTGGGAGACTCAGAGAATGTGCTTACTTTGAAGAGATTTTCTAAGCAAAAGGTGAAAAGGCTGGGAAAGGAAGCACAGGTTTTAAAAGAGAAAAATTTGATCAAGGGCATAAGCTCTTCGGCTTGTATACCACAAGTTCTGTGCACCTGTGCTGATCGAGTATATGCTGGGATACTACTAAATACACGTCTTGCTTGTCCATTGTCTTCCATACTTACATGTCCTTTTGGTGAATCATCAGCACGATATTGTGCTGCTTGTGTTGTTACTGCCTTAGAAGATTTACATAAGAATGGTGTTCTTTACAGAGGGGTATCACCTGATCTTCTGACTTTGGACCAAACTGGATGTATACAGCTAGTGGACTTCAGGTTTGGGAAGAAGCTCTCAGATGAAAGAACATTCACAATTTGTGGAATAGCAGACTCATTAGCTCCGGAGATTGTTCTGGGAAAAGGCCATGGTTTCCCTGCTGACTGGTGGGCATTGGGGGTTCTGATTTATTTCATGTTACGGGGTGAGATGCCTTTTGGATCGTGGAGAGAAAATGAGCTTGATACCGTAGCCAAAATTGCAAAACGGAAGCTAAACCTTCCAGAAACTTTCAGCCCAGAGGCTATTGATCTCATCACAAAGTTGCTTGATGGTGACGAAAGCACTAGAATTGGTAGCCAAGGTCCTGATTCTGTCAAAAGCCATCCTTGGTTTAATGGTGTTGACTGGGAAGGGATAAGACACCGTAGCGTCCCTGCTCCTCCAGAAATTATCTCTCGTATAACTCTATACTTGGAAATTCATTCTGAGGATTGCACTGGTTCCCAAGCTTCCCCGTCAGAGGAGGTAGATGAACTTAACATTCCTGAATGGCTTGAGGACTGGTAG 3237 0.435 MGCVYSRVCIGEVCSPRNSRINEGRNARTGDTAWLSPASSDVQEGEDRDQLNQLSLTRDSEAGIRRLARVSAQFLPPDGSRAVKIPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTNTDDNFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRVDAVEACHAAFLATNSQLHADFLDDSMSGTTAITVLVRGKTIYVANSGDSRAVIAERRGNDIVAVDLSMDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVFELTPNHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHINGLTDPAGGLSASYGDIVRTPVPQVVEVTGSESPSTLSWNSKNPRVRHDLSRARIRAIENSLENGQTWVPPSSAHRKTWEEEAQIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEPNGEVPRVLQRYTADKLSCFGELALMYNKPLQASVRAVTDGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLFSKLTILQLSQISESLSEVSFSNGQTIIDQNEAAALYIIQKGQVRITFDSDLLRNPNASSLKPDNQNENDDQQSMKELSIEKPEGSYFGEWTLLGENIGTFRAVAVGDVLCTVLTKEKFESEIGPLKTFSLEDQKSRDNSSDYLKESTKSLNFSSLDKIHVSDLEWKKIVYSTDCSEVGLTLLGDSENVLTLKRFSKQKVKRLGKEAQVLKEKNLIKGISSSACIPQVLCTCADRVYAGILLNTRLACPLSSILTCPFGESSARYCAACVVTALEDLHKNGVLYRGVSPDLLTLDQTGCIQLVDFRFGKKLSDERTFTICGIADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAIDLITKLLDGDESTRIGSQGPDSVKSHPWFNGVDWEGIRHRSVPAPPEIISRITLYLEIHSEDCTGSQASPSEEVDELNIPEWLEDW 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2151 1078 CDD CAP_ED 603 723 IPR000595 -
Alju01g2151 1078 SUPERFAMILY cAMP-binding domain-like 596 728 IPR018490 -
Alju01g2151 1078 SMART cnmp_10 603 741 IPR000595 -
Alju01g2151 1078 SMART cnmp_10 477 600 IPR000595 -
Alju01g2151 1078 Gene3D Jelly Rolls 590 744 IPR014710 -
Alju01g2151 1078 ProSiteProfiles Protein kinase domain profile. 748 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2151 1078 SMART serkin_6 774 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2151 1078 Coils Coil 796 816 - -
Alju01g2151 1078 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Alju01g2151 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 603 728 IPR000595 -
Alju01g2151 1078 Gene3D Phosphorylase Kinase; domain 1 766 851 - -
Alju01g2151 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Alju01g2151 1078 SMART PP2C_4 83 381 IPR001932 -
Alju01g2151 1078 SUPERFAMILY Protein kinase-like (PK-like) 750 1054 IPR011009 -
Alju01g2151 1078 CDD PP2Cc 109 383 IPR001932 -
Alju01g2151 1078 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Alju01g2151 1078 Pfam Cyclic nucleotide-binding domain 622 724 IPR000595 -
Alju01g2151 1078 Pfam Protein phosphatase 2C 120 362 IPR001932 -
Alju01g2151 1078 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Alju01g2151 1078 SUPERFAMILY PP2C-like 82 385 IPR036457 -
Alju01g2151 1078 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Alju01g2151 1078 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Alju01g2151 1078 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Alju01g2151 1078 Gene3D - 87 384 IPR036457 -
Alju01g2151 1078 Pfam Protein kinase domain 787 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2151 1078 Gene3D Jelly Rolls 442 585 IPR014710 -
Alju01g2151 1078 SUPERFAMILY cAMP-binding domain-like 442 587 IPR018490 -
Alju01g2151 1078 MobiDBLite consensus disorder prediction 20 49 - -
Alju01g2151 1078 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 458 1039 - -
Alju01g2151 1078 Gene3D Transferase(Phosphotransferase) domain 1 852 1037 - -
Alju01g2151 1078 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Alju01g2151 1078 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Alju01g2151 1078 CDD CAP_ED 477 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2151 Alju-ChrAlju01 18395603 18401983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2151 1 1078 PP2C-type Phosphatase Gene Family AT2G20050 68.339 0.0 1508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Alju01g2151 Pkinase 1.6e-28 CL0016