Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2113 ATGGCTCTTTCTTCTTCACACTCATTAACTTTCCCATGTTCAGTTTGTTTGCTTTGGCTCAATCAACTATTTCTTCAGGACCCTGTACTCTCTATCTGTATAGCTGAGCAAATGGGAAGAGCCACTCGGTGGTTGAAGAGCTTGTTTGGTATAAAGAAAGACAGAAACCATGTTTCTGAAGGAGAACTAAGAGATTTATGCCACAATCCAACCACTATACCACCAAACATCTCTCCTGCTGAAGCTGCTTGGCTTCAATCGTTCTACACAGAAACAGAGAAGCAGCAGAACAAGCACGCCATTGCGGTGGCCGCAGCCACAGCAGCCGCCGCTGACGCCGCCGTAGCAGCCGCTCAGGCTGCGGTGGCCGTCGTTAGGCTCACCAGCCATGGCAGAGGCACAATGTTCGGCGGCGGCGGCGGACACGAGAGATGGGCTGCCGTTAAGATCCAAACAGTATTCAGGGGTTACCTGGCTAGAAAGGCACTGAGAGCTTTGAAAGGATTGGTGAAATTACAAGCACTAGTGAAAGGCTATTTAGTGAGGAAGGAAGCTGCCGCAACATTGCATGGTATGCAAGCTCTTATTAGAGCCCAAGCCACCGTGAGGTCTCAGAAAGTTAGTCGCAGGCTTATGAACAGAGACAATGAAGTTTATAGATTTGAAGCTCGAGCTCGAAGATCCATGGAGAAATTTGATGACACTAGGAGTGAGTACACAGCACCAATTCACAGCAGAAGGATGTCTTCTTCTTTCGATGCAACAATAAATAACACTAATAGTTTCGATGGAAGCCCCAAAATTTTGGAAGTAGACACTGGTAGGCCAAGATCGAGGTCTCGGAGGACCAACACTTCAATTTCAGATTTTGGCGATGACCCTCAATTCCAAGCACTTTCCTCTCCTCTTCCAGTCCCTTCTTGTCATACCCCAGCTCGGTTATCGATACCGGACTGTCGCCGGAATCTGCAGGACTCCGATTGGGGGTTGACGGTGGAAGAATGCAGGTCGTCAACGGCACAGAGCACTCCTCGGTTCACCAATTCTTGTGGGTCGTTTAGTTGTAACGCTACAGCTTGCCGGAGCGTTTGCGGCGACGGTGGCAGCGGTGGTGATGGGTTTTTTTACCGGCAATACGGGAATTGCCCGAATTACATGGCGAATACTCAGTCGTTCAGGGCGAAATTGAGGTCTCACAGTGCTCCGAAACAGAGGCCGGAGCCGAAGAGGAGGGTATCTTTGAACGAATTGATGGAATGTAGGAGTAGTTTGAGCGGAGTTAGAATGCAGAGATCTTGCTCGCAGGTTCAGGAAGCCATTAATTTCAAGAATGCAGTGATGGGGAAGCTGGAAAAGTCTGGAGAATTTGGGAGGGAAAGAAGGGATAGCAATTACCGGCAGAGGAGATCTGCAAATCATCATGCTTCAACACGAAGATGGAGAGGACGTGAAAAAGAAGAGAAAGGAGATCTGCAACCGTCAAAGGTTGAGAGGTTGGAGAAGACGAAGAAGGGAGTTGATTCATTGGAGAGGTCGAGAGATCTGCAAATCATCATGATGAACAAAGACGAAGCTCGAGAGGTTGGAAAAGATGAAGACAAAGCTTGA 1608 0.4851 MALSSSHSLTFPCSVCLLWLNQLFLQDPVLSICIAEQMGRATRWLKSLFGIKKDRNHVSEGELRDLCHNPTTIPPNISPAEAAWLQSFYTETEKQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGGGHERWAAVKIQTVFRGYLARKALRALKGLVKLQALVKGYLVRKEAAATLHGMQALIRAQATVRSQKVSRRLMNRDNEVYRFEARARRSMEKFDDTRSEYTAPIHSRRMSSSFDATINNTNSFDGSPKILEVDTGRPRSRSRRTNTSISDFGDDPQFQALSSPLPVPSCHTPARLSIPDCRRNLQDSDWGLTVEECRSSTAQSTPRFTNSCGSFSCNATACRSVCGDGGSGGDGFFYRQYGNCPNYMANTQSFRAKLRSHSAPKQRPEPKRRVSLNELMECRSSLSGVRMQRSCSQVQEAINFKNAVMGKLEKSGEFGRERRDSNYRQRRSANHHASTRRWRGREKEEKGDLQPSKVERLEKTKKGVDSLERSRDLQIIMMNKDEAREVGKDEDKA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2113 535 MobiDBLite consensus disorder prediction 453 469 - -
Alju01g2113 535 MobiDBLite consensus disorder prediction 477 535 - -
Alju01g2113 535 Gene3D - 141 190 - -
Alju01g2113 535 Pfam IQ calmodulin-binding motif 144 164 IPR000048 GO:0005515
Alju01g2113 535 Pfam IQ calmodulin-binding motif 170 184 IPR000048 GO:0005515
Alju01g2113 535 Pfam Protein of unknown function (DUF4005) 337 427 IPR025064 -
Alju01g2113 535 ProSiteProfiles IQ motif profile. 143 171 IPR000048 GO:0005515
Alju01g2113 535 ProSiteProfiles IQ motif profile. 167 194 IPR000048 GO:0005515
Alju01g2113 535 SMART iq_5 142 164 IPR000048 GO:0005515
Alju01g2113 535 SMART iq_5 165 186 IPR000048 GO:0005515
Alju01g2113 535 PANTHER IQ-DOMAIN 5-RELATED 38 416 - -
Alju01g2113 535 MobiDBLite consensus disorder prediction 453 535 - -
Alju01g2113 535 MobiDBLite consensus disorder prediction 257 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2113 Alju-ChrAlju01 17992411 17995777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2113 38 429 IQD Protein Family AT3G16490 50.125 1.51e-93 289