Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2112 ATGTCAAATCTGCATTATGTTTTCAATTTTGTGCTGCTTCTTGTTCTTCTTCTGATGCAAAATCCGACCACAATGCTGTGCCATACAAAGGGATTGCGACCAAGGCATTCTTCTACTGTGACATCATCGACGACCAACATGACCAGAATCCAATTCTCAGAACAGCAATTCTTGAAATGGATTAAGTTCGTTGGTGGTCTCAGACACTCTGTTTTTGGGATAGCCAAAAACAAGCTTTTTCCTTCTTACACTTTGCATGTCTCCAAGAAGCCTTCTTCTGGACAATTTTCGACAATTCAAGGCGCAATTGATTCTCTTCCATTCCTAAATCTTGTGAGAGTCGTCATAAAGGTCAACGCAGGGGTTTACACGGAAAAAGTGAACATTCCTCCTATGAAATCCTTCCTAACCATACAAGGAGCAGGAGCAGACAAAACCATAGTTCAATGGGGAGACACAGCTCAAACAAAAGGGCCAGACGGGAAGCCATTGGGAACCTTTGGATCAGCAACATTTTCTGTGAATGCACCATATTTCATCGCCAAGAACATCACATTCAAAAACACAGCCCCAATTCCAGCACCAGGAGCAGTGGGAAAACAAGCAGTGGCATTGAGAATATCAGCAGACACGGCGACATTCCTAGGATGTAAATTCCTAGGAGCACAAGACACATTGTATGATCATGTGGGAAGACATTATTATAAAGACTGCTACATCGAAGGCTCAGTAGATTTCATATTCGGGGACGGCCTGTCTCTGTTCGAGAGGTGTCACGTGCATGCAATAGCGCAGAACGTAGGGGCGGTAACAGCACAGGGAAGGAACAGTATATTGGAGGACACAGGATTTTCGTTTGTACACTGTAAGGTCACGGGCTCTGGGGCACTGTACCTGGGTAGGGCATGGGGTCCCTTCTCTCGCGTGATCTTTGCTTACACCAATATGGACAACATCATCATTCCCAAAGGCTGGTACAACTGGGGTGACCCTAACCGGGAAATGACTGTGTTCTATGGACAATACAAATGCACAGGACCAGGAGCCAAGTATGCAGGCAGAGTATCTTGGTCAAGAGAGCTCACTGATGAGGAAGCTAAGCCTTTTATTTCACTTAGCTTCATTGATGGCTTTGAATGGATCAAATTGTAG 1152 0.4497 MSNLHYVFNFVLLLVLLLMQNPTTMLCHTKGLRPRHSSTVTSSTTNMTRIQFSEQQFLKWIKFVGGLRHSVFGIAKNKLFPSYTLHVSKKPSSGQFSTIQGAIDSLPFLNLVRVVIKVNAGVYTEKVNIPPMKSFLTIQGAGADKTIVQWGDTAQTKGPDGKPLGTFGSATFSVNAPYFIAKNITFKNTAPIPAPGAVGKQAVALRISADTATFLGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGDGLSLFERCHVHAIAQNVGAVTAQGRNSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVIFAYTNMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGAKYAGRVSWSRELTDEEAKPFISLSFIDGFEWIKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2112 383 ProSitePatterns Pectinesterase signature 2. 240 249 IPR033131 -
Alju01g2112 383 SUPERFAMILY Pectin lyase-like 80 382 IPR011050 -
Alju01g2112 383 Pfam Pectinesterase 90 377 IPR000070 GO:0030599|GO:0042545
Alju01g2112 383 Gene3D - 82 383 IPR012334 -
Alju01g2112 383 FunFam Pectinesterase 81 383 - -
Alju01g2112 383 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2112 Alju-ChrAlju01 17980654 17982739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2112 2 381 Carbohydrate Esterase AT5G47500 42.782 7.13e-103 306