Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2111 ATGGGGAACAAAATTGCGCGCACAACGCAAGTTTCTTCTTCCGAGTACTATCTTCATAACCTACCCTCCACCTACAATCTCGTCTTGAAGGAGATTTTAGGTCGAGGCCGTTTCTTCAAGTCTATTCAGTGCAAGCATGACGAGGGTTTGGTTCTGGTCAAGGTTTATTTCAAGCGTGGTGACTCCATCGATCTCAGAGAGTATGAACGGCGTCTGACTCAGATCAGAGACATTTTCAGTGGCATTGATCACCCCCACGTTTGGCCCTTTCAGTTTTGGCAGGAAACAGACAAAGCAGCATATCTCTTAAGGCAATATTTCTTTCATAATCTGCATGATCGACTTAGTACTCCACCTTTTCTCAGCCTTATTGAGAAGAAATGGTTGGCTTTTCAGCTGCTCCTAGCCGTGAAACAGAGCCATGAGAAGGGAGTATGTCATGGTGATATTAAGTGTGAGAATGTGCTCATTACGTCCTGGAATTGGCTTTACCTTGCGGACTTTGCATCCTTCAAGCCCACTTACATCCCATATGATGACCCCTCAGATTTTTCTTTTTTCTTTGACACGGGTGGAAGGAGACTTTGTTATCTAGCACCTGAGAGGTTTTATGAACATGGAGGGGAGATGCAGGTGGTACAAGATGCTTCACTAAAGCCATCTATGGATATATTTGCAGTTGGGTGTGTAATCGCTGAACTTTTCCTTGAGGGACAACCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGACACTATGATCCTAGCCAACATCTTGAGAAGATCCCAGATCCTGGAGTCCGTAAAATGGTATTGCACATGATTCAACTAGAACCAGAGTCACGGTGTTCTGCTGAAAGTTACCTGAAGGAATTTGCAGCAGTTGTGTTCCCAACCTATTTCTCACCATTTTTGCATGATTTTTACCGTTGTTTGAATCCTCTTCATTCTGATATGAAGGTTTTATTATGTCAAAGAGCTTTCCAGGAGATACTTAAACAAATGATGAACAGTAAATCATCTGAAGAGGTGGCTGCTACTTCTGGTGAGCTTTTGGGAGAGGTTGTTGGTAAAGAAAATGTCAATTTTATGAAGGACTCCCTGATAAAGAGAGATGAGATGGGAAGCGAGCTAATTCCTGATCACTATGAATGCCTCTTGAAGGGTGCTAAGAATCATGGTCATCTATCTGGTCGCCAGCATGTGATAGGAAATGCCCCCAATTCCACCCTTCCCGAGAATCTAAAAAATTTGCAATCTTCTGGTGAGCTCCTTCAAACTATCTCCAATGCATTCCGAGGAAATGACCATCCCTTTTTGAAGAACATTACAATGAATGATTTGAATTCGTTGATGTCCGATTATGATAGTCAATCAGATACTTTTGGGACCCCTTTCTTACCACTACCAAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATTACTTCTTTGCTCTGCTCCTGCACTCGTAATATCAAGTTGCCCCAATTGAGGAGGGCAGCTGTGCTCTTGTTGAAGGCTTCTGCATTATATACTGATGATGAAGATCGTCTGCAGCATGTTATCCCATATGTTATTGTAATGCTTTCTGATCCTTCAGCAATTGTGCGTTGTGCTGCTTTAGAGACGTTGTCCGATATTCTACCCCTTGTCCGACATTTGCCACCCAGCGATGCGAAGATATTTCCTGAATACATACTGGCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCCAGTAATATAGCTAAGCTGGCTCTTACTGCTTATGGATTCTTGATACACACAAAAAGTTTGAGTGAGGCAGGTGTACTTGATGAATTGAGTTCACCACACAAGTCATGGATATCATTTAGTGAGACTAGTGGAAGATTGCCGGGGATAAATGGTGATGTGCAACTTTTGCAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTAATGGGTCCAAAGCAAACACCAAATATTAGAAGAGCACTCCTTCAGGACATTGGGAAGTTGTGTTATTTCTTCGGTCAGAGGCACAGTAATGACTTCCTGTTACCCATTCTCCCTGCTTTCCTTAATGATCGGGATGAACAACTACGGTCTGTGTTCTATGAGAAGATCGTATATGTTTGCTTTTTTGTGGGAGAAAGAAGCGTCGAAGAATATCTTTTACCTTACATTGAGCAGGCTTTAAGTGACACAACAGAGGCTGTCATTGTCAGGGCCTTAGATTGTTTGACCATTCTTTGCAGAAGTGGTTTCTTCAGGAAGAGGATACTGCTTGAAATGATAGAGCGTGCATTTCCTTTACTATGTTATCCTAGTGAATGGGTGCGTAGATCAGTGGTCTCATTCATTGCTGCTAGCAGCGAGAGCTTGGGTGCGGTAGATTCTTATGTTTATCTTGCTCCTGTTATACAACCCTTCCTCCGCAGACAACCTGTATCTCTAGCTTCTGCAACGGCCCTTTTTTCTTGTTTAAAGCCTCCTGTCTCGAGACAGGTTTTCCATGAAGTATTAGAGAACTCTAGGAGTTCAGACATGTTAGAAAGACAAAGAAAGATATGGTATAGTTCATCATCACAATCTAAACTATGGGAAATGGATTCAGTGAGAAAAGGAATAGATGAGTTGGACTCATTGAAGAGCTGGCCTGACAAGCAACAAGGTCCTGGGGGTCAGCAATCTATTGGCACTAGCTTCCCACAGCCAGGGCTAACTGATTGTGATGAGGCTGACAAAAAGTTGAGAAATATGGGCGCCTTTATGCATAATGATTGCAGTATGATAGGACATCGTGATCCCCAATGCTTGGAAAAGTTACAGTTCTCTGGATTGATGTCACCTCAGGTTAGTTGTAGTAGTTTGCCGTATGAGAAGTCATCGAATGGCATACCTTTGTATTCTTTCAGCATGGATAGGCGGGCAATGGGAATTCCTCCTGCAGCATCTGATTCTCCACTGCAAATGAATTCTCTAGGTATCAGTTCATCCACCATGCCTTGGGTTAGTCCAGTTAGCAAGTCCTTTAATTTGGCTTCTTCAGTTCCAGTTCCAAAGTTTGTTTCAGGTTCTTTTAGCATCAGCGGTGGATCTAAACAGTTCTATCGAGTGGTTCATGAACCAGATGGTAGGGAAAATGAGACAGCCTATATTAATAGCAAAACTCAAGATGTAGGATTATCCACTGATAGCAAAGGTAGTTCAATCTCACTTGAAGATGTAACCAACCAAACTGATGCATCAGGATTTTCATCTTTTGCTGGAATGTCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTTTTGATTGCTCACCTCCAAGAGCACCGTTCATCTGTGAATGACATAGCAATTTCTACTGATCATAGCTTCTTTGTGAGTACATCTGATGACTCTACGGTCAAGATATGGGATTCGAGGAAGCTGGAAAAAGATATTTCGTTCAGGTCAAGGCTAACTTACCATTTGGATAGAAGCCGAGCGCTATGTGCAACAATGCTTCGGGGTTCTGCACAAGTAGTAGTTGGAGCATGTGATGGATTAATTCATATGTTTTCTGTTGATCATATCTCTAGGGGTCTAGGAAATGTGGTCGAGAAGTATTCTGGTGTTGCTGACATCACAAAAAAGGATGTAAAGGAAGGTGCCATCCTCAACCTATTGAACTACCCTGTGGATGCTTATACCATCATGTTTAGCACTCAGAACTGTGGTATTCATCTATGGGATACTAGGTCAAGTTCCAGTTCATGGACTCGAAAAGTTAATCCTGAGCAGGGCTATATTCCTTCTTTGGTAGTAGGGCCTTGTGGTAATTGGTTTGTTTCAGGTTCTTCCAGGGGCGTGCTTACTCTTTGGGATCTGAGATTTCTGATACCTGTGAACTCTTGGCAGTATTCCCTTGCTTGTCCTATAGAAAAGATGTGTCTCTTCCTTCCTCCTCCAAATGCCTCTCTATCTTCAACTGTGAGGCCCCTTGTTTATGTGGCTGCAGGTAGTAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTATTGAAAGTGACCAATTACGACAGTGATGCAGAAAAGTCTGAACTGCCATGGGCCTTGGCTAGACCTTCTAACAAGGGAACTGCTGAACCAGATTTGAGGCGGAATGTAAATCCCAAGTATAGAGTTGATGAGCTAAATGAACCTCCAACCCGTCTTCCTGGTATTCGTTCATTGCTTCCCTTGCCAGGGGGTGATTTAATGACTGGGGGTACTGACTTGAAGATACGTCGATGGGATCACTACAGTCCTGACAAAAGTTACTGTATATGTGGGCCTGTCTTGAAAGGAGTGGCGAACAATGATTTGTATGAAACAAAATCTAGCTTTGGCGTGCAAGTTGTACAGGAGAAAAAGAGACGTCCCCTTTCAAACAAGTTGACAGCAAAGGCAGTTGTCACGGCTGCTGCCACCGATCCTGCAGGTTGCCACCGTGATTCGATCCTTTCTTTGGCTTCTGTTAAGCTAAACCAGAGACTCTTGTTATCAAGCGGTAGAGACGGGGCTATCAAGGTCTGGAAGTAG 4596 0.4323 MGNKIARTTQVSSSEYYLHNLPSTYNLVLKEILGRGRFFKSIQCKHDEGLVLVKVYFKRGDSIDLREYERRLTQIRDIFSGIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTPPFLSLIEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVVQDASLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGHYDPSQHLEKIPDPGVRKMVLHMIQLEPESRCSAESYLKEFAAVVFPTYFSPFLHDFYRCLNPLHSDMKVLLCQRAFQEILKQMMNSKSSEEVAATSGELLGEVVGKENVNFMKDSLIKRDEMGSELIPDHYECLLKGAKNHGHLSGRQHVIGNAPNSTLPENLKNLQSSGELLQTISNAFRGNDHPFLKNITMNDLNSLMSDYDSQSDTFGTPFLPLPKDSMRCEGMVLITSLLCSCTRNIKLPQLRRAAVLLLKASALYTDDEDRLQHVIPYVIVMLSDPSAIVRCAALETLSDILPLVRHLPPSDAKIFPEYILAMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHTKSLSEAGVLDELSSPHKSWISFSETSGRLPGINGDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRHSNDFLLPILPAFLNDRDEQLRSVFYEKIVYVCFFVGERSVEEYLLPYIEQALSDTTEAVIVRALDCLTILCRSGFFRKRILLEMIERAFPLLCYPSEWVRRSVVSFIAASSESLGAVDSYVYLAPVIQPFLRRQPVSLASATALFSCLKPPVSRQVFHEVLENSRSSDMLERQRKIWYSSSSQSKLWEMDSVRKGIDELDSLKSWPDKQQGPGGQQSIGTSFPQPGLTDCDEADKKLRNMGAFMHNDCSMIGHRDPQCLEKLQFSGLMSPQVSCSSLPYEKSSNGIPLYSFSMDRRAMGIPPAASDSPLQMNSLGISSSTMPWVSPVSKSFNLASSVPVPKFVSGSFSISGGSKQFYRVVHEPDGRENETAYINSKTQDVGLSTDSKGSSISLEDVTNQTDASGFSSFAGMSIPDSGWRPRGVLIAHLQEHRSSVNDIAISTDHSFFVSTSDDSTVKIWDSRKLEKDISFRSRLTYHLDRSRALCATMLRGSAQVVVGACDGLIHMFSVDHISRGLGNVVEKYSGVADITKKDVKEGAILNLLNYPVDAYTIMFSTQNCGIHLWDTRSSSSSWTRKVNPEQGYIPSLVVGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLACPIEKMCLFLPPPNASLSSTVRPLVYVAAGSNEVSLWNAENGSCHQVLKVTNYDSDAEKSELPWALARPSNKGTAEPDLRRNVNPKYRVDELNEPPTRLPGIRSLLPLPGGDLMTGGTDLKIRRWDHYSPDKSYCICGPVLKGVANNDLYETKSSFGVQVVQEKKRRPLSNKLTAKAVVTAAATDPAGCHRDSILSLASVKLNQRLLLSSGRDGAIKVWK 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2111 1531 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1531 IPR045162 GO:0004674|GO:0016236|GO:0045324
Alju01g2111 1531 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Alju01g2111 1531 Pfam HEAT repeat 524 552 IPR000357 GO:0005515
Alju01g2111 1531 CDD STKc_Vps15 16 303 - -
Alju01g2111 1531 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2111 1531 Gene3D - 1321 1531 IPR015943 GO:0005515
Alju01g2111 1531 Gene3D - 1044 1217 IPR015943 GO:0005515
Alju01g2111 1531 Gene3D - 421 610 IPR011989 -
Alju01g2111 1531 ProSiteProfiles HEAT repeat profile. 524 554 IPR021133 -
Alju01g2111 1531 MobiDBLite consensus disorder prediction 889 918 - -
Alju01g2111 1531 ProSiteProfiles HEAT repeat profile. 692 730 IPR021133 -
Alju01g2111 1531 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 470 609 - -
Alju01g2111 1531 SUPERFAMILY ARM repeat 308 819 IPR016024 -
Alju01g2111 1531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Alju01g2111 1531 SUPERFAMILY Protein kinase-like (PK-like) 26 322 IPR011009 -
Alju01g2111 1531 ProSiteProfiles Trp-Asp (WD) repeats profile. 1498 1531 IPR001680 GO:0005515
Alju01g2111 1531 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1498 1531 - -
Alju01g2111 1531 SMART WD40_4 1485 1531 IPR001680 GO:0005515
Alju01g2111 1531 SMART WD40_4 1156 1195 IPR001680 GO:0005515
Alju01g2111 1531 SMART WD40_4 1257 1296 IPR001680 GO:0005515
Alju01g2111 1531 SMART WD40_4 1403 1437 IPR001680 GO:0005515
Alju01g2111 1531 SMART WD40_4 1108 1147 IPR001680 GO:0005515
Alju01g2111 1531 Gene3D - 1219 1315 IPR015943 GO:0005515
Alju01g2111 1531 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2111 1531 SUPERFAMILY WD40 repeat-like 1112 1529 IPR036322 GO:0005515
Alju01g2111 1531 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2111 1531 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1115 1147 - -
Alju01g2111 1531 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1090 1156 - -
Alju01g2111 1531 Gene3D Transferase(Phosphotransferase) domain 1 22 366 - -
Alju01g2111 1531 FunFam Protein kinase family protein / WD-40 repeat family protein 620 830 - -
Alju01g2111 1531 Pfam WD domain, G-beta repeat 1111 1147 IPR001680 GO:0005515
Alju01g2111 1531 MobiDBLite consensus disorder prediction 895 911 - -
Alju01g2111 1531 Gene3D - 611 836 IPR011989 -
Alju01g2111 1531 ProSiteProfiles Trp-Asp (WD) repeats profile. 1115 1147 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2111 31 242 AGC Kinase Gene Family AT3G08730 25.676 3.84e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Alju01g2111 Pkinase 2.3e-20 CL0016