Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2101 ATGGAGAAGGGCTGGATGATTCTGGCTTTTGATCTCCTCATTCTCCTCCATCTGGGTGCGGCAAGAGCAGCTTTTGGAGTCGGCGGTGGCATTGGCGTAGGTGTCGGTGTTGGCGGCGGCGGCGGAGTGGTTTGGGTCGGCGGTGGGGCCAGTAGCGGCTCGCCGGAGTCTTCTTCAGCGCCAAAGCAAGACAAAGCTTACACTGCTCTGCAGGCATGGAAAGCAGCGATAACAGAGGACCCATTGAGGATTCTGGAGAGTTGGAATGGTTCTAATGTGTGTTCTTATAAAGGTGTGTTTTGTGCCAACCCTGAGGATGCTTCCGGCGAGCCAGTGGTCGCCGGAATAGATCTCAACCACGCGAATCTCAGAGGAAGTCTTGTAAAAGAGCTCTCTTTACTCACTGAAATGTCTCTTCTTCACCTGAACAGCAACAGATTTGCAGGTACAGTTCCTGATACATTCAGAGACCTCTCGTCTCTTGAAGAGTTAGACCTCAGCAACAACCAGCTCTCGGGTCCTTTCCCCACAGTGACCTTTTCAATACCCAGGCTGGTTTACTTGGACATCAGATTCAACTCTTTCTCTGGGACACTCCCGGATGATCTTTTCAACAAGAATCTGGATGCTATTTTACTCAACAACAACCAATTCGAAGGCGAAATCCCCCAAAATTTGGGCAATTCCCCTGCTTCAGTCATCAATTTAGCTAACAACAAGTTCAGTGGAAGCATCCCAGCGAGTTTTGGTTTCATGGGTTCTAAGCTGAAAGAGATTCTCTTCCTCAATAATCAATTAACAGGGTGTATTCCTGAAGGGGTTGGGATCTTCACACAGATGCAAGTTCTTGATGTAAGCTACAATTCATTAATGGGTCATTTGCCTGACACAATTTCTTGTCTTGAAGACATACAAGTTCTGAATTTGGCACATAACAAGCTATCTGGGGAATTATCGGATGTGATCTGCTCACTGAGAAACCTGTTGAATCTAACAGTTGCGTATAATTTCTTTTCTGGGTTCAGCCAGGAATGCTCGAGGCTTTTCGTTAGGAATGTGGGTTTTGATTTCTCAGATAATTGCATTCCTGGGAGGGACATGCAGAGACCTCAACCACAGTGTTCTGTGATCCCAGGTGGTGGCTTGAATTGTCTCAGAATCCCAACTCCGAAGCTTGTTTGTGGTTCGCTTTCTGTAAGTCTCTCTAAGCAAACCCATCCCACTCCATCTCCTTCTTCTTCTTCTTCACCTTGA 1254 0.4705 MEKGWMILAFDLLILLHLGAARAAFGVGGGIGVGVGVGGGGGVVWVGGGASSGSPESSSAPKQDKAYTALQAWKAAITEDPLRILESWNGSNVCSYKGVFCANPEDASGEPVVAGIDLNHANLRGSLVKELSLLTEMSLLHLNSNRFAGTVPDTFRDLSSLEELDLSNNQLSGPFPTVTFSIPRLVYLDIRFNSFSGTLPDDLFNKNLDAILLNNNQFEGEIPQNLGNSPASVINLANNKFSGSIPASFGFMGSKLKEILFLNNQLTGCIPEGVGIFTQMQVLDVSYNSLMGHLPDTISCLEDIQVLNLAHNKLSGELSDVICSLRNLLNLTVAYNFFSGFSQECSRLFVRNVGFDFSDNCIPGRDMQRPQPQCSVIPGGGLNCLRIPTPKLVCGSLSVSLSKQTHPTPSPSSSSSP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2101 417 SUPERFAMILY L domain-like 67 362 - -
Alju01g2101 417 PRINTS Leucine-rich repeat signature 161 174 - -
Alju01g2101 417 PRINTS Leucine-rich repeat signature 301 314 - -
Alju01g2101 417 Gene3D Ribonuclease Inhibitor 233 370 IPR032675 -
Alju01g2101 417 Pfam Leucine rich repeat 138 194 IPR001611 GO:0005515
Alju01g2101 417 Pfam Leucine rich repeat N-terminal domain 67 101 IPR013210 -
Alju01g2101 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 56 411 - -
Alju01g2101 417 FunFam Leucine-rich repeat receptor protein kinase EMS1 246 344 - -
Alju01g2101 417 Gene3D Ribonuclease Inhibitor 63 232 IPR032675 -
Alju01g2101 417 FunFam Leucine-rich repeat extensin-like protein 1 67 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2101 Alju-ChrAlju01 17870801 17872054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2101 61 384 Leucine-rich Repeat extension Gene Families AT3G22800 50.769 4.93e-106 320