Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2100 ATGAAGATTGAGCAATTGGACGATGTGGATTTCAGTATGGACGAAGGGAGTAATGAGAATCAGATTGTGAGGGTTGACGCAAAGAGAGCGTTAGTTGGAGCAGGTGCTCGGGTCCTGTTTTACCCGACGCTTTTGTATAATGTACTTCGGAACAAGATCGAAGCTGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTATTATTGGGTGCTGTTCCATTCCCTAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGTTGGTTCCATCATCATTGTATCATGCTCATGAGATTGATCATTTAGTGATTCCTACAAGGGATTATCTCTTCGCCCCTTCACTAGAGGATATTAGCCGTGCTGTGCAATTCATTCATCAAAATGCATGCTGTGGTAAAACTACTTATGTTCATTGTAAAGCTGGTCGAGGAAGGAGCACAACGATTGTTCTTTGTTATTTGGTTGAATATAAGCACATGACACCCACAACTGCTCTGGATTATGTACGGTCTCGCAGGCCTAGGGTGCTGCTAGCTCCATCACAGTGGAAGGCTGTTCAAAAGTACAGCAAGTCCCAACCTTCCCCTTCTAGTGCCAGGCCTACTTCTGCTTCAGCTCCTGCTCCTACGCTTACTCCATACTCTCCTTCTAGGGATGCAGTTCTTATAACCCAAGCTGATCTTGAGGGTTACCATAATGCATGTGATGCTGGTATGCAGTTGGCCATTGTTACTAAAGTGCCAAAGGCCAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCGTCCCTTAAAGTTTCTGGTAGCAGTGTCCCGGCAATCAGGCGGTTGCCCATTTCAGAGGCACGTGCTTGCTAA 891 0.4557 MKIEQLDDVDFSMDEGSNENQIVRVDAKRALVGAGARVLFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHEIDHLVIPTRDYLFAPSLEDISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPTTALDYVRSRRPRVLLAPSQWKAVQKYSKSQPSPSSARPTSASAPAPTLTPYSPSRDAVLITQADLEGYHNACDAGMQLAIVTKVPKAKPMIARLSCLFASLKVSGSSVPAIRRLPISEARAC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2100 296 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Alju01g2100 296 CDD PTPMT1 59 203 IPR044596 GO:0004721
Alju01g2100 296 MobiDBLite consensus disorder prediction 199 223 - -
Alju01g2100 296 MobiDBLite consensus disorder prediction 199 224 - -
Alju01g2100 296 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Alju01g2100 296 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Alju01g2100 296 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Alju01g2100 296 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 274 - -
Alju01g2100 296 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
Alju01g2100 296 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 201 IPR029021 -
Alju01g2100 296 FunFam Dual specificity phosphatase domain protein 59 206 - -
Alju01g2100 296 Pfam Dual specificity phosphatase, catalytic domain 81 201 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2100 Alju-ChrAlju01 17860547 17862500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2100 9 276 Protein tyrosine phosphatase (PTP) family AT2G35680 53.512 9.01e-102 299