Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2099 ATGAGCAACTTGAGCTCAGTGAACAGTTGTGATCTGATAGATGCCAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAACCAAACCGGACTGGTTAGGTCTTCCGGCTGGCGTGAAGTTTGATCCAACGGACCAAGAACTAATCGAACATCTCGAAGCCAAAGTGGAGTCCAAGAATATGAAATCTCACCCTTTGATCGATGAGTTCATCCCTACCATTGAAGGAGAAGACGGGATTTGTTATACCCACCCAGAGAAACTCCCAGGAGTAACAAGAGACGGGTTGAGCAGGCACTTTTTTCACAGACCATCGAAGGCATACACGACAGGAACAAGAAAGAGGAGGAAAATACAGAACGAGAGCGAGATGCAAGGCGGAGAAACACGGTGGCACAAGACGGGGAAGACGCGGCCGGTGATGGTGAACGGCAAGCAAAAGGGCTGCAAGAAGATTCTAGTACTCTACACCAACTTCGGCAAGAACCGAAAACCCGAAAAAACCAACTGGGTCATGCACCAGTACCACCTTGGACAACACGAGGAGGAGAAAGAAGGAGAGCTTGTCGTATCCAAGATTTTCTACCAGACACAGCCACGCCAGTGTAACTGGTCCGATCGAATCGCCACCACCGGCGAACCCAGCGGCGGCGACTTCGTTGTGACTGCCAATAGTAGTAGAAGAGACAGCGGGAGTGGAAGTTGCTCTTCTTCTAAGGACATTAACAACGTTGTTGTTACAGCCCACCGGGACGATCAGATGTCGGCGGTCGTCGGCGTTGTTCCTCCGCCCATGTCATCCTACGTTCATCATCATCATCATGGCTTGGATATCCAGCAACACCTCAAACCCGACCATTTTGGATTCATTCCGTTTAGGAAGAGCTTCGACGAGGTGGGAATAGGAGAGGGTTCGATGGGGAGAGATCAGGTGCAGGCGGCATCAGGAGAAGAAGTTAATGAAGGACAAAGGCAACAGCAGCAGCAACAACATCATCAACATCATCAAGTGGCTCAGCATCAGCATCAGCATCATCAGAATATGGCGAGCACGGCCTTTCATATAAGTAGGCCTTCACTTCCGATCTCAACCCTAATCTCTCCACCGCCTCTTCATCATACTTCTATCATCCTTGATGATAACTCCTATCATGTCTCCAGAATTATGCTCCAAAATGACAATTTTCAGCAACAGGAGCAGCAGCATCATAAACTAGGAGGGAGCTCTGCGTCTGGTTTGGAGGAACTCATAATGGGATGCACTTCTTCAACTGATATTAAAGCGGAATCATCTGTCTCCGTCACAAACCCTCAAGAAGCTGAATGGCTCAAATACTCGTACTGGCCCGACCCGGATAACCCGGATCATCACGGGTAA 1404 0.4929 MSNLSSVNSCDLIDAKLEEHQLCGSKQCPGCGHKFETKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEMQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRIATTGEPSGGDFVVTANSSRRDSGSGSCSSSKDINNVVVTAHRDDQMSAVVGVVPPPMSSYVHHHHHGLDIQQHLKPDHFGFIPFRKSFDEVGIGEGSMGRDQVQAASGEEVNEGQRQQQQQQHHQHHQVAQHQHQHHQNMASTAFHISRPSLPISTLISPPPLHHTSIILDDNSYHVSRIMLQNDNFQQQEQQHHKLGGSSASGLEELIMGCTSSTDIKAESSVSVTNPQEAEWLKYSYWPDPDNPDHHG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2099 467 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 8 353 IPR044799 GO:0003700
Alju01g2099 467 SUPERFAMILY NAC domain 39 205 IPR036093 GO:0003677|GO:0006355
Alju01g2099 467 MobiDBLite consensus disorder prediction 125 144 - -
Alju01g2099 467 ProSiteProfiles NAC domain profile. 44 205 IPR003441 GO:0003677|GO:0006355
Alju01g2099 467 Gene3D NAC domain 53 209 IPR036093 GO:0003677|GO:0006355
Alju01g2099 467 MobiDBLite consensus disorder prediction 125 145 - -
Alju01g2099 467 MobiDBLite consensus disorder prediction 325 343 - -
Alju01g2099 467 MobiDBLite consensus disorder prediction 310 357 - -
Alju01g2099 467 Pfam No apical meristem (NAM) protein 45 186 IPR003441 GO:0003677|GO:0006355
Alju01g2099 467 FunFam NAC domain-containing protein 73 53 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2099 Alju-ChrAlju01 17848923 17853130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2099 10 464 NAC Transcription Factor Family AT5G56620 52.110 5.48e-138 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g2099 NAM 2.5e-24 No_clan