Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2090 ATGACAATGTCGATCAGATTCATCTCCTTGCTGATGATGCTTCATCTTGTTCTTATGGTTCCAGTTCTTGGACAGCGACAGACAGGATTCATCAGTATTGATTGTGGAGGTCCAGAGAATTTTGAATACACAGATGACAGCGATCAAATAAAGTACAGCACAGATGGGGCTTACATACTAACAGGGGTTAACAAAAACGTGTCATCACAATACTCATATCCAAACAATCCCAATCTGCCATTGCCAATGTCAGATCTCAGAAGTTTCCCTAAGGGAAAGTGGAATTGTTATACATTAAGAGCTGGACGAAGAGGAAGCTTACATTTAATAAGGGCCTATTTTTTGTATGGAAACTATGATGGAGAAAACAAGCTTCCAGAATTTGATCTCTATGTTGGTGTCAATTTCTGGTCCTCAGTGAGTTTTAAAAAGGTTTCAGAGCAAGTTACACTGGAAATTATCAGCATGGCAGAATCAGAGGTGACTAATGTTTGTCTTGTGAACAAAGGACTGGGAACTCCTTTTATCTCAGCTTTAGAACTAAGACCAGTCAATAGTTCTATTTATAATACTCAGTTTGGGGCATCTGCTTCACTGTTACTTTTCAAAAGATGGGACCTTGGAGCAATTATTAATGGTAGTGGTAGATATGAAGATGACATATATGACAGAATTTGGTACCCATATGGCTCATCTTCCTGGGATTCTGCAAGCACTTTTCATGCTATAAATGGCAATAACAATGGCTATAGAACACCATTTGAAGTGATGAGAACTGCTGCAAAACCCAAGAATGCTAGTGCTCCTTTAGAATTCTCTTGGACACCAGATGATCCAAATTCAAAATTTTATGTCTACTTGTATTTTGCTGAGTTGAAGCAGCTTAAGATTAACCAACTGAGGAAATTCAGAGTATCCTGGAATGGACATTTATTGTTTGGACCCTTAATCCCAAGCTACTTAGTTGCAGCTGCAGTATCAAATTTGAAACCTTTGATGGGACATGAACATAGAATTTCTCTTCATAGAACTGAAGATTCAACCCTTCCACCTATCCTTAACGCAGTTGAGATATTTCAAGTTAGAATGATGGATGCATTTCCAACACTTGAGAAAGATGTAAATGCTATTATGGATATCAAAGATGCATATGGAATTAAAGGAAACTGGGTGGGTGATCCATGTGAGCCAAAGAACCACACTTGGGAAGGCTTAATATGTAACTATAGCAATTCACATCCTCCACAAATTGTATATCTGAATCTGAGCTCATGCGGTTTGAGTGGGGTGATTGCTTCTGCCATCTGCAACCTCTTATCACTTGAATCATTGGATTTATCAAACAATAGCTTATCTGGGTCAATTCCGAATTTTCTGGCAGAAATAAGATCTCTTAAAATTTTGAATTTGAAAGGCAACCAACTGTCAGGTTTTGTCCCAGCAGCTCTACTGAAAAAATCAAGGGCAGGATTGCTTAAACTGAGTGTGGATGCCCAGAATCTTTGTGGCTCAGATAAGTGCGAGAAAAGGCTAAATATATTTGTTCCCATAGTTGCTACAATATCATCGCTTCTAGTTCTTCTGATTGTTTTCATTATCATCTGGAAAGTTAGAAGAAATATACAACCAGGTAAGGAAACAAGTAATCCCAACAAAGAAGGAACACATGTGGCATCAAAGAAGTGGCAATATAGTTATGCAGAGGTATGTGACATCACCAACAACTTTAAAATGGTCATTGGGAAGGGGGGATTTGGGACCGTGTACCGTGGTCAAACGAAAGATGGGAAACAAGTTGCAGTAAAGATGCTTTCTCCAACATCATCTCAAGGGCCAAGGGAATTTCAGACTGAGGCTGAGCTCTTGATGACAGTCCATCACAAAAATTTGGTAGCCTTTATTGGTTATTGCGATGACGGAAACAAAATGGCACTCATATACGAGTACATGGGAAATGGAAACCTCAAAAACTATCTTTCAGCAAGAAATTCAGGTTGCTTGAGTTGGGGAAGAAGACTTCAGATAGCAATTGACGCTGCACAGGGATTGGAGTATTTACACCATGGATGCAAGCCATCTATAATACATAGAGATGTGAAGACGGCCAATATTCTTCTAAGTGAAAAATTGGAAGCTAAGATAGCAGATTTTGGCCTCTCCAAGGTGTTTAAGAATGACACTAAAGATGTAGGATCCTCAATGAATACAAATGATCAAGTAAATGCAGAACCTGCTGTTATGGGTACCAAAGGGTACCTTGACCCAGAATACTACAAATCAAGGAAGTTGAATGAGAAAAGTGATATCTATAGCTTTGGAATTGTTCTGTTAGAAGTATTTACAGGTCAACCTGCTGTGTTAAAGGGAAAGGAATCAGTTCACATACTTGACTGGTTAAGACCTGAGCTTAGAAGAGGAGATTTGAGCAAAATTATAGATCCAAAGCTGCAAGGTAAATACAATGCATGTTCTGTGTGGAAGGCTTTAGGAGCAGCAGTGGCATGTACTGCATCAGCCTCTATCCATAGACCAACGATGAGTTGTGTGTTATCTGAGCTAAAAAAGTGTTTGGAAACAGAGGTTCCTGGCCAGAGTGAAACATATATTGTACCAGCACAGATCTATAGGGAGTTGCATAGTTTGTCTGAGACATATTCCATGGATGATAAATCTATCACCTATCCTTTTCCAAGATAG 2697 0.3908 MTMSIRFISLLMMLHLVLMVPVLGQRQTGFISIDCGGPENFEYTDDSDQIKYSTDGAYILTGVNKNVSSQYSYPNNPNLPLPMSDLRSFPKGKWNCYTLRAGRRGSLHLIRAYFLYGNYDGENKLPEFDLYVGVNFWSSVSFKKVSEQVTLEIISMAESEVTNVCLVNKGLGTPFISALELRPVNSSIYNTQFGASASLLLFKRWDLGAIINGSGRYEDDIYDRIWYPYGSSSWDSASTFHAINGNNNGYRTPFEVMRTAAKPKNASAPLEFSWTPDDPNSKFYVYLYFAELKQLKINQLRKFRVSWNGHLLFGPLIPSYLVAAAVSNLKPLMGHEHRISLHRTEDSTLPPILNAVEIFQVRMMDAFPTLEKDVNAIMDIKDAYGIKGNWVGDPCEPKNHTWEGLICNYSNSHPPQIVYLNLSSCGLSGVIASAICNLLSLESLDLSNNSLSGSIPNFLAEIRSLKILNLKGNQLSGFVPAALLKKSRAGLLKLSVDAQNLCGSDKCEKRLNIFVPIVATISSLLVLLIVFIIIWKVRRNIQPGKETSNPNKEGTHVASKKWQYSYAEVCDITNNFKMVIGKGGFGTVYRGQTKDGKQVAVKMLSPTSSQGPREFQTEAELLMTVHHKNLVAFIGYCDDGNKMALIYEYMGNGNLKNYLSARNSGCLSWGRRLQIAIDAAQGLEYLHHGCKPSIIHRDVKTANILLSEKLEAKIADFGLSKVFKNDTKDVGSSMNTNDQVNAEPAVMGTKGYLDPEYYKSRKLNEKSDIYSFGIVLLEVFTGQPAVLKGKESVHILDWLRPELRRGDLSKIIDPKLQGKYNACSVWKALGAAVACTASASIHRPTMSCVLSELKKCLETEVPGQSETYIVPAQIYRELHSLSETYSMDDKSITYPFPR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2090 898 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Alju01g2090 898 FunFam Leucine-rich repeat receptor-like kinase 372 504 - -
Alju01g2090 898 Pfam Malectin-like domain 33 361 IPR024788 -
Alju01g2090 898 Gene3D Phosphorylase Kinase; domain 1 580 650 - -
Alju01g2090 898 PANTHER OS07G0107800 PROTEIN-RELATED 31 857 - -
Alju01g2090 898 FunFam Leucine-rich repeat receptor-like protein kinase 551 649 - -
Alju01g2090 898 Gene3D Ribonuclease Inhibitor 374 490 IPR032675 -
Alju01g2090 898 PRINTS Leucine-rich repeat signature 441 454 - -
Alju01g2090 898 PRINTS Leucine-rich repeat signature 462 475 - -
Alju01g2090 898 Pfam Protein tyrosine and serine/threonine kinase 577 785 IPR001245 GO:0004672|GO:0006468
Alju01g2090 898 SUPERFAMILY L domain-like 388 485 - -
Alju01g2090 898 ProSiteProfiles Leucine-rich repeat profile. 440 462 IPR001611 GO:0005515
Alju01g2090 898 Gene3D Transferase(Phosphotransferase) domain 1 651 869 - -
Alju01g2090 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Alju01g2090 898 SUPERFAMILY Protein kinase-like (PK-like) 558 853 IPR011009 -
Alju01g2090 898 Pfam Leucine rich repeat 416 475 IPR001611 GO:0005515
Alju01g2090 898 FunFam Os07g0541700 protein 652 740 - -
Alju01g2090 898 SMART serkin_6 574 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2090 898 ProSiteProfiles Protein kinase domain profile. 574 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2090 898 CDD STKc_IRAK 580 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2090 Alju-ChrAlju01 17710504 17714482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2090 3 884 Receptor kinase-like Gene Family AT4G29180 50.223 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju01g2090 Malectin_like 9.4e-104 CL0202