Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2083 ATGGGGACAAATGATGTGAGGGTAGATGTGAAGCTGAACAAGTACGTCTGGAGCCAGGGAATTCGAAGTGTCCCAAGGAGAATTAGGGTACGTATTGCTCGCAAGAGGAATGATGATGAGGATGCAAAGGAAGAGCTTTATTCCCTGGTCACTGTAGTTGATACCACCCGAGAAGAGCTCAAAGGGTTGGGCACCAAGGTTATTGAAGATGAGGATTGA 219 0.4703 MGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVDTTREELKGLGTKVIEDED 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2083 72 SMART Ribosomal_L31e_2 1 45 IPR000054 GO:0003735|GO:0005840|GO:0006412
Alju01g2083 72 SUPERFAMILY Ribosomal protein L31e 1 44 IPR023621 -
Alju01g2083 72 Gene3D - 1 72 IPR023621 -
Alju01g2083 72 FunFam Os08g0505300 protein 1 72 - -
Alju01g2083 72 Pfam Ribosomal protein L31e 1 44 IPR000054 GO:0003735|GO:0005840|GO:0006412
Alju01g2083 72 PANTHER 60S RIBOSOMAL PROTEIN L31 1 71 IPR000054 GO:0003735|GO:0005840|GO:0006412
Alju01g2083 72 ProSitePatterns Ribosomal protein L31e signature. 6 20 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2083 Alju-ChrAlju01 17658556 17658774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2083 1 72 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 75.000 3.40e-35 113