Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2065 ATGAAGCGTCAAGTATTAGTAGTGAGAAAAACTGAAGGTGGAAGAGGTTCAAGCAGGAGTACCCGTGTTAGGTACGGGGAGTGTCAGAAGAATCATGCGGCGAATTCCGGCGGACACGCCGTTGACGGTTGCCGGGAATTCATAGCCACCGGGGAGGAAGCAAATGCTGCTCTTACATGTGCTGCCTGTGGATGCCACAGAAACTTCCACAAGAGATTGGTGGACACTTCTTCTACTACTGATGAGTCCTCTTCACTTCCTTCTAATTAA 270 0.4926 MKRQVLVVRKTEGGRGSSRSTRVRYGECQKNHAANSGGHAVDGCREFIATGEEANAALTCAACGCHRNFHKRLVDTSSTTDESSSLPSN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2065 89 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 73 IPR006456 -
Alju01g2065 89 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 76 - -
Alju01g2065 89 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 72 IPR006456 -
Alju01g2065 89 Pfam ZF-HD protein dimerisation region 23 73 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2065 Alju-ChrAlju01 17466389 17466658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2065 2 89 Zinc finger-homeobox gene family AT1G18835 56.818 1.97e-28 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju01g2065 ZF-HD_dimer 8.7e-27 No_clan