Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2064 ATGGGGAGACCGCCCTGTTGTGATAAGGAAGGGGTCAAGAAAGGACCTTGGACTCCCGAAGAAGACATCGTTTTGGTCTCTTATATCCAGGAACATGGTCCTGGCAATTGGAGGGCTGTGCCCACTAATACAGGGCTGGCACGATGCAGCAAGAGTTGCAGACTTAGATGGACTAATTACCTAAAGCCAGGAATTATACGTGGCAACTTCACAGACCAAGAGGAGAAGATGATAATCCATCTTCAAGACCTTTTGGGCAACAGATGGGCAGCCATAGCCTCGTACCTTCCACAGAGAACCGACAACGACATAAAGAACTATTGGAACACCCATTTGAAGAAGAAGCTCAAGAAATTGCAACCACCACCATCATCATCAGCCTCACAATCAATGCCCAGAGGCCAGTGGGAAAGAAGGCTTCAAACAGACATCCACATGGCCAAGAGAGCTCTTAGGCAGGCTCTATCTCCAGATCAGACCACACCTTCTTCTTACTTACCAGAATCATCAAATCCCTCAAAACCAGCAACAACCCAGTCCTTTAGCTATGCCTCAAATGCAGATAACATAGCTCGTTTGTTAAAAGGATGGATGAAAAATCCACCAAAGGCCTCCACAACAACAAGCTCAGCAATCACTCAAAGTTCTATAAATAACCTTGCTGCTTCTGCTTCAGGAAACGATACTGCTTCTAGCAAAGGAATCACCACCACAAGTGTTAAATTCTCTGACACTAGTTTTGTCTCCTTGTTGGGGTTAGAGCCTTTGGATTATTGCTCTTCGAATTCTGATTTTTCTCCGGAGGCTACTACGACTCTCGAAAGCAAGCCGGATTGTACAGGGGTCCATGACGAAATGCCCTTGTATTTGCTTGAGAAGTGGCTTCTCGACGACGCTGCTACGATCACATCGCTTGAAGATGAAGACGTCCATTTTTTCTAG 942 0.4597 MGRPPCCDKEGVKKGPWTPEEDIVLVSYIQEHGPGNWRAVPTNTGLARCSKSCRLRWTNYLKPGIIRGNFTDQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQPPPSSSASQSMPRGQWERRLQTDIHMAKRALRQALSPDQTTPSSYLPESSNPSKPATTQSFSYASNADNIARLLKGWMKNPPKASTTTSSAITQSSINNLAASASGNDTASSKGITTTSVKFSDTSFVSLLGLEPLDYCSSNSDFSPEATTTLESKPDCTGVHDEMPLYLLEKWLLDDAATITSLEDEDVHFF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2064 313 MobiDBLite consensus disorder prediction 152 182 - -
Alju01g2064 313 Gene3D - 13 66 - -
Alju01g2064 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Alju01g2064 313 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju01g2064 313 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju01g2064 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 221 - -
Alju01g2064 313 SMART sant 13 63 IPR001005 -
Alju01g2064 313 SMART sant 66 114 IPR001005 -
Alju01g2064 313 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju01g2064 313 CDD SANT 16 61 IPR001005 -
Alju01g2064 313 MobiDBLite consensus disorder prediction 121 135 - -
Alju01g2064 313 MobiDBLite consensus disorder prediction 115 135 - -
Alju01g2064 313 Gene3D - 69 143 - -
Alju01g2064 313 CDD SANT 69 111 IPR001005 -
Alju01g2064 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Alju01g2064 313 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju01g2064 313 FunFam Transcription factor MYB30 68 125 - -
Alju01g2064 313 MobiDBLite consensus disorder prediction 154 182 - -
Alju01g2064 313 FunFam MYB-related transcription factor 13 66 - -
Alju01g2064 313 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2064 Alju-ChrAlju01 17453202 17454382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2064 1 300 MYB Transcription Factor Family AT5G62470 47.458 7.09e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g2064 Myb_DNA-binding 2.7e-14 CL0123