Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2062 ATGGAGGAAAGGAATGAGATGGAGAAGATGAGCGATGAAACCATGTTACCAGGTTTTAGGTTTCACCCCACAGACGAGGAGCTTGTTGATTTTTACCTCAGAAGAAAGATTCAGCAGAAATCTCTCCCTATTGAGCTCATCAAGCAAGTAGATATCTACAAATACGATCCTTGGGATCTTCCAAAGCTGGCAAGCACTGGGGAGAAAGAATGGTATTTCTACTGTCCAAGGGATAGAAAATACAGGAACAGTCCACGACCAAATAGAGTGACAAGAGCTGGGTTTTGGAAAGCCACGGGAACAGACAGGCCTATATACTCATCATCAGAAGGCAAGTGCATCGGCTTGAAGAAATCTCTTGTGTTCTACAGAGGCAGAGCCGCCAAAGGCATCAAAACCGATTGGATGATGCATGAATTTCGCCTCCCTTCTACGCCGCCGCCAGATTCATCGCCGTCGTCCAAGAAGCCCTTTGACAACTACAACAAAACCCACTCTACCCCACAGGATTCATGGGCGATTTGTAGGATATTCAAGAAAACAAACTCCATGTCCATGGCACAGAAAGCTCTATCTCATACATGGATGGCTCATCAGTTTCCAGCGGGCAGCATATCGGTGTCCGATATGCTCGCTGACAGTGCAAGCCGTAATAATAATCACTTGCGTTCAGAGAACATGTCTTGCATCACAGAATTATACGAGCAGGTGTCTAGTGGTAATTTCTCTGGTTCAGATCATGTTGGCTTCAATAAGGCCTCCTCCCAGATGCCTGTCGTCTCCGACGGTGACATGGTAGTAGCAGACGCCTTCATGTTCTCTACTTTCGACTCATCAGGCCCTTGTGCCTATATAGGCTTTGAAGGGCCAAACAATAATATGATTAATAATGGCGTCTCGGTGGTGACTACACCTCATCATCATGAAGACGTACAAGCATTAAACATGGCTGCATCTACAGTAGCAGAAGCTATTGGGTTTCCTTTCAGTTTGCCTCCTCGAGTTTCAAACGATGCTTGGAAGCCTAATCTCCTATGGGAATCATCGCCACCTTGTCCTAGCGACATGTCTACTAATAATAGATGCAGCACTTGA 1095 0.4594 MEERNEMEKMSDETMLPGFRFHPTDEELVDFYLRRKIQQKSLPIELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSPRPNRVTRAGFWKATGTDRPIYSSSEGKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSTPPPDSSPSSKKPFDNYNKTHSTPQDSWAICRIFKKTNSMSMAQKALSHTWMAHQFPAGSISVSDMLADSASRNNNHLRSENMSCITELYEQVSSGNFSGSDHVGFNKASSQMPVVSDGDMVVADAFMFSTFDSSGPCAYIGFEGPNNNMINNGVSVVTTPHHHEDVQALNMAASTVAEAIGFPFSLPPRVSNDAWKPNLLWESSPPCPSDMSTNNRCST 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2062 364 ProSiteProfiles NAC domain profile. 15 180 IPR003441 GO:0003677|GO:0006355
Alju01g2062 364 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 224 - -
Alju01g2062 364 SUPERFAMILY NAC domain 10 180 IPR036093 GO:0003677|GO:0006355
Alju01g2062 364 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Alju01g2062 364 Gene3D NAC domain 24 185 IPR036093 GO:0003677|GO:0006355
Alju01g2062 364 MobiDBLite consensus disorder prediction 141 167 - -
Alju01g2062 364 FunFam NAC domain-containing protein 35 24 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2062 Alju-ChrAlju01 17444365 17445561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2062 2 219 NAC Transcription Factor Family AT5G39820 61.441 1.46e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g2062 NAM 9e-38 No_clan