Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2049 ATGGCCTTCCCTCCTCACTCCTTCCTGTTTCAGACCCACGAAGATCACGATCACCTCCCTTCCACCTCCATCAACGCCTACACCTCCTTCACACCCAAACTCTTCGAAGGGCCTTTGATGTTGAAGAGATCCATGTCATTTTCAGGGATCGAGAACAAGCATGAGGACGAAGAGCTTTCCGACGACGGATCTCAGATGATGATGGGGGAGAAGAAGAAGAGGCTGAACATGGAGCAAGTGAAGGCACTCGAAAAGAGCTTCGAGTTAGGGAACAAGCTTGAGCCTGAACGCAAAATGCAGCTGGCTAAGGCTCTGGGACTTCAGCCAAGGCAGATAGCTATTTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCAGCTCGAAAAGGAATATGAAGCTCTCAAGAACAAGTTTGAAGCTCTAAAAGCTGATAATGATGCCCTTAAGGCTCATAACCACAAATTACACGCTGAGTTATTGGCTCTAAAGGGGAGAGATTGCTGTGAAGGAGGAACTATGAACCTTAAGAAAGAATCTGAAGTTTGTTGGAGCAATGGCAGTACTGAGAATAGTTCGGACATTAACTTGGATCTGTCGAGATCACCATTTATAAACAGTCCTGTAACTTCAGTACACAATGGTAAAAGCTTTCTTCCGTCTAATAATGCCCTTAAGCCAGCCAGCATAACCCAGCTCCTCCAATTCTCTTCAAGATCAGAACTCCAAGATGAAAGCTTCTCCAACATGTTTCAAGGCGGCGGCAGTGGCGTCGATGAGCACCACAGTTTCTGGCCCTGGCCAGAGCACGGCAGCCATCAGTTTCGTTGA 831 0.4741 MAFPPHSFLFQTHEDHDHLPSTSINAYTSFTPKLFEGPLMLKRSMSFSGIENKHEDEELSDDGSQMMMGEKKKRLNMEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKNKFEALKADNDALKAHNHKLHAELLALKGRDCCEGGTMNLKKESEVCWSNGSTENSSDINLDLSRSPFINSPVTSVHNGKSFLPSNNALKPASITQLLQFSSRSELQDESFSNMFQGGGSGVDEHHSFWPWPEHGSHQFR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2049 276 Coils Coil 118 152 - -
Alju01g2049 276 PRINTS Lambda-repressor HTH signature 106 122 IPR000047 GO:0003677
Alju01g2049 276 PRINTS Lambda-repressor HTH signature 97 106 IPR000047 GO:0003677
Alju01g2049 276 SUPERFAMILY Homeodomain-like 63 128 IPR009057 -
Alju01g2049 276 FunFam Homeobox-leucine zipper protein ATHB-13 61 130 - -
Alju01g2049 276 ProSitePatterns 'Homeobox' domain signature. 101 124 IPR017970 GO:0000981|GO:0006355
Alju01g2049 276 Pfam Homeobox associated leucine zipper 126 165 IPR003106 GO:0006355|GO:0043565
Alju01g2049 276 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 43 206 IPR045224 GO:0003700
Alju01g2049 276 SMART HOX_1 69 130 IPR001356 GO:0003677
Alju01g2049 276 CDD homeodomain 71 127 IPR001356 GO:0003677
Alju01g2049 276 Gene3D - 63 135 - -
Alju01g2049 276 Pfam Homeodomain 71 124 IPR001356 GO:0003677
Alju01g2049 276 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2049 Alju-ChrAlju01 17266251 17267925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2049 1 269 Homeobox Transcription Factor Family AT3G01220 51.601 5.52e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju01g2049 Homeodomain 5.3e-16 CL0123