Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2048 ATGCACCTTGATCTTGCTGAACAATTTGAAATTTACAATACAGTTTTATCTGTAAATGTAAACATACGTTATAATTCTGCAGTGGGGTGTATGTATACACGAGGCGAATGTGTGTTGGGTTGTGAAGAAATGGCTGGTGCTTTGAACCTAGAAAAGTCAAAGGCAAAGAAGAAAACTGACGTTGAAGCTCGAAGTCCGAAATGGTGGATGAAGTTGAGTGCTGCCATCGGAGGCTGCTTAGTTTCGAAGTCCAAAGCCAACGGGGACGCTGGCTCTGCAGAAAGGGACCACTCTACCAAGAAATCCGAATCAGGAGCTAGATCATCATCCTTGTCGCACTTCGAGGAAATAAAATTTTCTAACAATCTTAGAAGGTTTTCTTTTGATGAGCTCAAGGAAATCACATATAATTTTAGACCTAGCAGTATTCTTGGCCAGGGAGGTTTTGGCTGTGTTTTTAAAGGTCTGATAAAACAAGCAAAACCAACTGGTGGCTCGGCGAATATTGCAGTTGCAGTAAAGATTCTTAACATTGGAGGACTTCAAGGCCACAGAGAATGGCTTACTGAGGTCAATTATCTTGGAGAACTCAGGCATCCGAACCTAGTTAAATTAATAGGCTACTGTATTGAGCAAGAAAAAAGGTTACTGGTGTACGAGTTTATGCCTCGAGGAAGCTTGGACAACCAACTGTTTAGGAGGTCTACGCCACTTCCATGGCCGATCAGACTGAAAATTGTGGTTGGTTCTGCAAAGGGCCTTGCATTTCTGCATGAAGAAGCTGACAGAACAGTGATATTTAGGGACTTCAAAACATCTAATATCCTGCTGGATGCGGACTTCAATGCAAAACTTTCTGATTTCGGACTTGCCAAAGATGGTCCTGAGGGGGACTCAACTCATGTGTCTACTCGAGTGATGGGAACTTTAGGGTATGCAGCTCCTGAATATGTCATGACAGGACACCTTACGGTGAAGAGTGACGTGTACAGTTTCGGGGTAGTTGTGCTAGAATTGCTGACAGGAAGAAAGGCCATGGACAAGAACAGGCCAAGAGGGGAGCATAGTTTGGTAGAGTGGGTAAGGTCGAGCTTTGCAGACAGAAAAACATTCACCAAACTGATGGACCCTCGCCTTCAAGGTATGTACTCCCACAGAGGAGCTCAGACAGCATTCCAGGTGGCTGCTCGCTGCCTTGCCCGTCCCCCGAGAGCAAGACCAACCATGTCTGAGGTTGTCGCAATCTTAGAGCCATTGCTTGATCTCGACGACATTCCTCTCTTGCCTTCAACGCCTTTCCACCCATCATTCCAGCCTGGCTCCTCTTCCTCCTCCTCCTCTTCCTCCAGGAGCTTACCCAACTCTCCTTTTCGTCCATACTATCCTCTTCCCAATCCCAGTCCTAAGGCAAGCATTCCATGA 1422 0.4592 MHLDLAEQFEIYNTVLSVNVNIRYNSAVGCMYTRGECVLGCEEMAGALNLEKSKAKKKTDVEARSPKWWMKLSAAIGGCLVSKSKANGDAGSAERDHSTKKSESGARSSSLSHFEEIKFSNNLRRFSFDELKEITYNFRPSSILGQGGFGCVFKGLIKQAKPTGGSANIAVAVKILNIGGLQGHREWLTEVNYLGELRHPNLVKLIGYCIEQEKRLLVYEFMPRGSLDNQLFRRSTPLPWPIRLKIVVGSAKGLAFLHEEADRTVIFRDFKTSNILLDADFNAKLSDFGLAKDGPEGDSTHVSTRVMGTLGYAAPEYVMTGHLTVKSDVYSFGVVVLELLTGRKAMDKNRPRGEHSLVEWVRSSFADRKTFTKLMDPRLQGMYSHRGAQTAFQVAARCLARPPRARPTMSEVVAILEPLLDLDDIPLLPSTPFHPSFQPGSSSSSSSSSRSLPNSPFRPYYPLPNPSPKASIP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2048 473 FunFam Serine/threonine-protein kinase BIK1 105 221 - -
Alju01g2048 473 FunFam Serine/threonine-protein kinase PBS1 222 426 - -
Alju01g2048 473 ProSiteProfiles Protein kinase domain profile. 138 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2048 473 SUPERFAMILY Protein kinase-like (PK-like) 123 453 IPR011009 -
Alju01g2048 473 MobiDBLite consensus disorder prediction 434 455 - -
Alju01g2048 473 MobiDBLite consensus disorder prediction 87 107 - -
Alju01g2048 473 MobiDBLite consensus disorder prediction 457 473 - -
Alju01g2048 473 MobiDBLite consensus disorder prediction 89 103 - -
Alju01g2048 473 MobiDBLite consensus disorder prediction 431 473 - -
Alju01g2048 473 ProSitePatterns Protein kinases ATP-binding region signature. 144 174 IPR017441 GO:0005524
Alju01g2048 473 Gene3D Phosphorylase Kinase; domain 1 118 221 - -
Alju01g2048 473 Gene3D Transferase(Phosphotransferase) domain 1 222 424 - -
Alju01g2048 473 PANTHER OS01G0588500 PROTEIN-RELATED 99 419 - -
Alju01g2048 473 CDD STKc_IRAK 144 417 - -
Alju01g2048 473 Pfam Protein tyrosine and serine/threonine kinase 142 415 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2048 Alju-ChrAlju01 17251093 17255560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2048 85 416 Glycoside Hydrolase AT3G07070 46.588 6.11e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju01g2048 PK_Tyr_Ser-Thr 3e-46 CL0016