Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2039 ATGTACGGCTTTGAAGCTCTTACTTTCAACATTCATGGCGGTTACCTGGAGGCTATCGTGCGAGGACACCGTGCTGGGTTGCTGACAGCCGCTGATTACAACAATTTGTGTCAATGTGAAACCCTTGAAGATATCAAGATGCACCTTTCTGCTACCGAGTATGGCCCTTACCTACAGAATGAGCCTTCCCCATTGCATACGACTACAATTGTGGAGAAATGTACTCTTAAACTGGTGGATGACTATAAGCACATGTTATGCCAAGCCACAGAACCCTTGTCAACCTTTTTAGAGTACATCACATATGGTCACATGATAGACAATGTGGTTTTGATTGTTACTGGCACGTTGCATGAAAGAGATGTCCAAGAATTATTAGAGAAATGTCATCCACTGGGTATGTTTGACAGCATTGCTAGTCTCGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTACTTGTGGATACTCCTCTTGCTCCATACTTCTCTGACTGCATTACATCAGAGGACTTGGATGATATGAACATTGAAATAATGAGGAATACTCTTTATAAGGCATATCTTGAAGACTTCTACAAATTTTGTCAGAAACTTGGTGGCGCCACAGCTGAAATCATGTCTGACCTTCTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACGATAAACAGCATTGGTACTGAACTCACCAGAGATGATCGTAGGAAATTATACTCTCATTTTGGTTTGCTGTACCCTTATGGGCATGAGGAGCTTGCTGTCTGTGAAGACATTGACCAGGTCCGTGCAGTGATGGAAAAATATCCCCCTTATCAATCTATCTTTGCTAGATTGTCATATGGAGAGAGCCAGATGCTTGACAAGGCATTCAATGAAGAGGAGGTGAAGAGGCTTTGCCTAGCGTTTGACCAACAGTTCCATTATGCTGTGTTTTTCGCATATATGAGGTTAAGGGAGCAGGAGATTCGGAACCTGATGTGGATTTCAGAATGTGTTGCTCAAAATCAAAAGTCCAGAGTACATGACAGTCTTACTGTTGAGAAGACTGTTTACCAAAAAAGTATAACTCTGGCGATCCTTTTCAATTTGGAGGCAACATGAAAGTCGGTTAGAAAGGCAAGCGCGGTGGCGCGTTTCAGCTTCAGAAGAGATCACGCCTTTCGCCCCTTCCCTGTCATGTCCACTGCTCTCAACTTCTAG 1209 0.4351 MYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLEDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSDCITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSHFGLLYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFARLSYGESQMLDKAFNEEEVKRLCLAFDQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSLTVEKTVYQKSITLAILFNLEATXKSVRKASAVARFSFRRDHAFRPFPVMSTALNF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2039 402 FunFam V-type proton ATPase subunit 206 309 - -
Alju01g2039 402 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Alju01g2039 402 SUPERFAMILY V-type ATP synthase subunit C 14 347 IPR036079 -
Alju01g2039 402 Gene3D - 206 309 IPR035067 -
Alju01g2039 402 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Alju01g2039 402 Gene3D - 91 195 IPR035067 -
Alju01g2039 402 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 345 IPR016727 GO:0033179|GO:0046961|GO:1902600
Alju01g2039 402 FunFam V-type proton ATPase subunit 91 205 - -
Alju01g2039 402 FunFam V-type proton ATPase subunit 14 128 - -
Alju01g2039 402 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2039 Alju-ChrAlju01 17143351 17148188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2039 1 348 Primary Pumps ATPases(2) AT3G28710 92.529 0.0 691