Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2036 ATGGAGACGGCCGTGATGATTAAAAGTGAAGTGAGCAAAAGGAGCCAACCCATGGCAGAAGATCAGTTGCAAGGAACTCGTTATGTCAAGAGACGGCGAAGAGAGCCTTGTGCAGCTGTACTTGATAACAATGATGCTCCAAGTGATCAGGTGCAACAGCAGCTGAAGCCACAGCTACATGGTGATCAAAATTTAAGTACGAGCACTATGAAAAGAAGCTCAAGATTTCGTGGTGTAAGCAGACATCGATGGACTGGTCGATTTGAAGCTCACCTGTGGGACAAGCTCTCTTGGAATGTAACACAGAAGAAGAAAGGGAAGCAAGGGGCTTACGATGAAGAAGAATCAGCAGCAAGAGCTTATGATTTAGCTGCAATTAAGTACTGGGGAACATCTACTTTCACTAATTTTCCGATATCAGATTATCAGCAAGAGATAGAGATGATGGAGACCATGACTAAAGAGGAGTACTTAGCTACTCTAAGAAGAAAGAGCAGTGGCTTCTCAAGAGGCGTATCTAAGTACAGAGGCGTTGCAAGGCACCACCATAATGGTAGATGGGAAGCAAGGATAGGGAGAGTGTTTGGAAACAAATACCTCTATCTTGGCACTTATAGCACCCAAGAGGAAGCCGCTCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGATCCATGCTGTGACAAACTTTGATTTGAGTACTTACATAAGATGGTTAAAACCTACAAGAGAACACATCCAAGAAGCAATACCTGAATCACAGGTGGTAGCAGAGGCTCAGGCAGAGACATCCACATCTATCTACACTCCAAAAGAGGAGAATAAATCCTTGAACCTTCACAGTAATTCTTTCACAGCTTACCTGAACTCTCCTTGTACGCACGATTTACTTGAAAGCAAAGCCCCTTTAATGTCGAGCAACAACAATAAGGCATCTTCTCCTACTGCCCTTGGCCTTCTCTTTCGTTCTTCGATATTCAGAGAACTAGTCAAAAGGAACCCAAACATATCTGGAGATGAAACTGATGGAGAAGACTCAAGGTCAAGGGATTTACAGCAGCTTGCGGGTGATGCCGAGCTAGGTGGGATCTTCTACGATCTAATTGGCAATGATGTCCCGTTTGTCTGCGATCCCGGCAGGTACAACTCAGGATTGCAAGAAAGAGACTTCCAGAAAGGAATCAGCAAGCATCAAAACAAACCAATCACAAAGGAAAAGAAAGAAGGAGCAAAATGGCTGATTGAACTGTGGTTAATACGTTAA 1266 0.44 METAVMIKSEVSKRSQPMAEDQLQGTRYVKRRRREPCAAVLDNNDAPSDQVQQQLKPQLHGDQNLSTSTMKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAAIKYWGTSTFTNFPISDYQQEIEMMETMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPTREHIQEAIPESQVVAEAQAETSTSIYTPKEENKSLNLHSNSFTAYLNSPCTHDLLESKAPLMSSNNNKASSPTALGLLFRSSIFRELVKRNPNISGDETDGEDSRSRDLQQLAGDAELGGIFYDLIGNDVPFVCDPGRYNSGLQERDFQKGISKHQNKPITKEKKEGAKWLIELWLIR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2036 421 SUPERFAMILY DNA-binding domain 74 140 IPR016177 GO:0003677
Alju01g2036 421 Gene3D AP2/ERF domain 74 140 IPR036955 GO:0003700|GO:0006355
Alju01g2036 421 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Alju01g2036 421 MobiDBLite consensus disorder prediction 1 29 - -
Alju01g2036 421 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 Pfam AP2 domain 74 130 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 ProSiteProfiles AP2/ERF domain profile. 75 138 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 FunFam AP2-like ethylene-responsive transcription factor 173 234 - -
Alju01g2036 421 CDD AP2 74 140 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 MobiDBLite consensus disorder prediction 41 78 - -
Alju01g2036 421 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 49 306 - -
Alju01g2036 421 MobiDBLite consensus disorder prediction 45 74 - -
Alju01g2036 421 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Alju01g2036 421 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Alju01g2036 421 SMART rav1_2 75 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2036 Alju-ChrAlju01 17130869 17133922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2036 71 236 AP2-EREBP Transcription Factor Family AT5G57390 67.456 2.05e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju01g2036 AP2 3.9e-09 CL0081