Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2022 ATGAATTCTAAAGAAATGTTTGCTTCAGTAGGTTCCATAATCGCTTCATTAATGTTCGTTTGGGCGATGTTCCAGCAATATTTCCCCTACCAACTTCGCAACCAAATCGAGAAATACTCTCAAAGGCTCGTCACTTTGGTGTACCCTTACATCCAAATCACATTCCACGAGCTCACCGGGGAGCGTCTCATGCGCAGCGAAGCCTATTCCGCCATAGAAAACTACCTCAGCTCACGCGCCTCCACACAGGCCAAGCGTCTCAAAGCCGATATCGGAAAAAACAACCAATCTCTGGTGCTCAGCATGGACGACCACGAAGAAGTAGCAGAGGAATTCAAAGGAGCTAAACTATGGTGGGCCTCCGGCAAGAACATCTCAAAATCTCAGTCTCTGTCGTTTCATCCCGTCACCGACGAGAAAAGGTACTACAAGCTCACTTTCCATAAACGACATAGAGATTTGATTCTGGGGACGTATTTGAATTATGTTATGAAAGAGGGGAAAGCTATTAAGGTGAAAAATAGGCAGAGGAAGCTTTATACGAATAATGGATCATATTGGAGCCATGTCGTTTTTGAGCATCCAGCGACCTTTCAGACTTTAGCCTTGGATCCAGAGAAGAAGGAGGAAATTATTGATGATCTAATTACTTTCAGTAAGGCTGAGGAATTTTTTGCTAGAATTGGAAGGGCCTGGAAAAGAGGATATTTGCTTTATGGTCCTCCGGGAACTGGGAAGTCCACCATGATCGCCGCCATGGCGAATCTCTTGGGCTATGATCTCTATGATTTAGAATTGACTGCTGTGAGGGACAATACTGAATTGAGGAAGCTACTCATTGAAACTTCAAGTAAGTCTATAATTGTGATTGAGGATATAGATTGTTCGCTTGATTTGACTGGGCAAAGAAGGAAGAAGGAGAAAAAGGAGGATGAAGAAGAGAATAAAGATCAAAGGCAAAAACCAGGAGGTGGGGAAAAAGAGGCTAGAATTAGTCAAGTTACTCTTTCTGGGCTTTTGAACTTCATTGATGGGTTATGGTCTGCTTGTGGTGGAGAGAGACTCATTGTGTTCACAACAAATCATATAGAGAAACTTGATCCTGCGTTGATTCGAAAAGGAAGAATGGATAAGCACATAGAGTTGTCATACTGTAGCTTCGAGGCGTTTAAGGTTCTTGCTAAGAATTATCTGAGAATTGAGTCACACCATCTGTTTCCCAGAATTGGTGAGTTGCTGAAAGAAGTTAAAATCACACCAGCTGAAGTGGCAGAGCACTTGATGCCCAAGTCTGCTTCTGGGGATTATGAAGTTCAATTGAAGAACTTGATTGAAGCTCTTGAAACGACAAGAGAGGAAGAGGCAAGAAAGATTGAAGCTTTGAGGAAACAGGAAGCTGATGGGATGCATGAGTCATAG 1419 0.4292 MNSKEMFASVGSIIASLMFVWAMFQQYFPYQLRNQIEKYSQRLVTLVYPYIQITFHELTGERLMRSEAYSAIENYLSSRASTQAKRLKADIGKNNQSLVLSMDDHEEVAEEFKGAKLWWASGKNISKSQSLSFHPVTDEKRYYKLTFHKRHRDLILGTYLNYVMKEGKAIKVKNRQRKLYTNNGSYWSHVVFEHPATFQTLALDPEKKEEIIDDLITFSKAEEFFARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVRDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRKKEKKEDEEENKDQRQKPGGGEKEARISQVTLSGLLNFIDGLWSACGGERLIVFTTNHIEKLDPALIRKGRMDKHIELSYCSFEAFKVLAKNYLRIESHHLFPRIGELLKEVKITPAEVAEHLMPKSASGDYEVQLKNLIEALETTREEEARKIEALRKQEADGMHES 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2022 472 Coils Coil 433 464 - -
Alju01g2022 472 Pfam Domain associated at C-terminal with AAA 28 121 IPR025753 -
Alju01g2022 472 FunFam AAA-ATPase ASD, mitochondrial 188 380 - -
Alju01g2022 472 ProSitePatterns AAA-protein family signature. 354 372 IPR003960 GO:0005524|GO:0016887
Alju01g2022 472 Pfam ATPase family associated with various cellular activities (AAA) 237 383 IPR003959 GO:0005524|GO:0016887
Alju01g2022 472 Gene3D - 381 447 - -
Alju01g2022 472 PANTHER BCS1 AAA-TYPE ATPASE 9 454 - -
Alju01g2022 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 431 IPR027417 -
Alju01g2022 472 Gene3D - 188 380 IPR027417 -
Alju01g2022 472 MobiDBLite consensus disorder prediction 302 326 - -
Alju01g2022 472 SMART AAA_5 232 386 IPR003593 GO:0016887
Alju01g2022 472 MobiDBLite consensus disorder prediction 302 328 - -
Alju01g2022 472 CDD RecA-like_BCS1 211 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2022 Alju-ChrAlju01 16922112 16923530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2022 207 386 Calmodulin-binding Proteins AT3G56690 26.596 4.49e-10 60.5