Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2008 ATGAGATGGAAGTCGCCTGGTTTGTTCAAACCCACCAAGCTCCCTATATTCAATAGGAAGCCAACGCAGAAGCGTTTGGCAAATCTTGAGTCTTGTACGCTTGCAAGAACAAAGAACGTCGTCGTGGTTGTGGGTAAAATTAAAATCATGGATGGGGATCAGGAAACAAGTGTGGCTCCATCCTCATCAGTCACTGCAAAGAAGAACAAGAATGGTTCCATTCGATCCATTTTCATGCACGCCGATACAGAAGATTGGTTCCTCATGGTGCTCGGCATCATTGGGTCCCTCGGCGACGGTTTCACCACCCCTCTCGTCCTCCTTATCAGTAGCCGCTTGATGAACAGTGTTGGCTCTAGTTCTACCCTCGCTCCAACTTCTTTTTCCCATGACATTAACAAGAATGCGGTGAACATGCTGTACTTGGCTGCTGGCTCCTTCGTCGCTTGCTTTCTCGAGGGATATTGCTGGACCAGAACAGGGGAAAGACAAGCTACCAGAATGAGAGGCAGGTATTTGAAGGCGGTGCTCAGACAAGATGTTGCTTACTTTGATCTTCACGTCACAAGCACGTCGGAGGTCATCACCAGCGTCTCCAACGACAGCCTTGTAATCCAAGATGCTATTGCTGAAAAGGTGCCGAACTTCTTGATGAACGTGTTTATGTTCATCGGAAGCTACATAGCGGCTTTTGCATTATTATGGAGGCTAGCTATTGTGGGGTTCCCATTCGTGGTTCTGCTCGTGATCCCTGGTTTACTTTACGGTAGGACTCTGATGGGGTTGGCGAGGAAGATCAGAGAGGAATATAATCACGCCGGTACAATAGCAGAGCAGGCAATATCTTCCATAAGAACTGTGTATTCCTTTGTTGGGGAAAGCAAGACCATCGGCGCTTACTCTCATGCTTTACAAGGATCTGTTCAATTGGGTCTCAAGCAGGGCTTAGCTAAGGGCTTAGCCATCGGAAGCAACGGCGTCGTCTTCGCCATCTGGTCCTTCATGTCCTATTACGGCAGCCACCTCGTCATGTACCACGGCGCTAAAGGCGGTACTGTTTTCGTCGTCGGAGCCGCCATGGCCGTTGGTGGCCTATCCTTAGGTGCGGCTTTATCGAACATGAAGTACTTCTCGGAAGCGAGTACAGCAGGGGAGCGTATAATGGAAGTGATAAAAAGAGTTCCGAAGATTGATTCGGACAACATGAGTGGAGAGATTCTGGAGAGTGTTTCAGGAGAAGTGGAATTCGCACAGGTACAGTTCGCGTACCCGTCGAGGGCAACAAGCATAATCCTAAGCGATTTCAACTTGAAGATTCCGGCGGGGAAGACAATGGCCTTAGTGGGAAGGAGTGGATCAGGGAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGTGGGAGAGATAAGGCTTGATGGAGTGGCCATTCACAAGATGCAGCTCAAGTGGCTGAGATCACAGATGGGTCTGGTCAGCCAAGAGCCTGCTCTGTTCGCCACCAGCATCAAGGAGAACGTTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAAGTCATTCAAGCTGCCAAAGCTTCTAATGCTCACAACTTCATTTCACACCTGCCTCAGGGCTACGATACTCAGGTTGGCGAAAGAGGAGTTCAAATGTCAGGAGGGCAAAAACAGAGGATCGCCATTGCGCGAGCAATAATAAAGAAACCAAGACTGCTTCTGCTAGATGAAGCAACCAGTGCGTTAGATTCTGAATCAGAGCGAGTTGTTCAAGAAGCTCTGGACAAAGCAGCCGTGGGTCGCACCACAATTATCATCGCCCACCGTTTATCCACCATCCGAAACGCCGACGTCATTGCCGTCGTCCAGAATGGAAAGATCATGGAGATGGGCTCGTACGACGAGCTCACCCAAAACGACGATGGCCTTTACACCTCTCTGGTTCGTCTTCAACAGACAGAACAACTAAAAACCCAACAAGAAGATACTGTCTCTGCCCTGTCTTCTATATCAAACAGAGACATGAACAACACTAGTAGCCGCAGGCTTTCCCTGGTGAGTCGTTCTAGCTCTGCTAACTCAATGGCACGGAATCCAGCTTCAGTTGCTGATGAAGACGATGGTCACCATGTGACAGAAGATAAGAAATTCCCCGTTCCTTCGTTTAGGAGATTGTTGGCTCTTAATCTCCCAGAATGGAAGCAGGCAATTATGGGGTGTATAAGTGCGGTTCTCTTTGGTGCGGTTCAGCCATTGTATGCATTCGCAATGGGGTCCATGATATCTGTGTATTTCTTGACGGACCACGATGAGATCAAAAGGAAGACGAGAATTTATGTCCTCTGCTTTTTGGGGTTGGCTATCTTTTCTCTACTAATTAATATAAGCCAGCATTATTATTTTGCTTACATGGGAGAGTACCTGACCAAAAGGGTTAGAGAGAGAATGCTCTCAAGGATTCTCACATTTGAAGTTGGATGGTTCGATCAGGACGAGAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAAAGATGCCAATGTGGTGAGGTCTTTGGTGGGTGATAGAATGGCTTTACTGGTACAAACTTGTTCAGCAGTGACAATAGCCTGCACAATGGGGTTGGTCATTGCATGGAGGCTGGCACTTATTATGATAGCCATTCAGCCTCTTATTATCGCTTGCTTCTACACAAGGCGTGTCCTTCTAAAGAGCATGTCTAGCAAAGCCATTAAAGCCCAAGAGGAAAGTAGCAAGTTAGCTGCTGAAGCGGTTTCAAATCTTCGAACTGTCACTGCCTTCTCTTCACAAGATCGCATATTGAAGATGCTCCAGAAGGCTCAAGAAAGGCCAAGCAAAGAGAGTGTTCGTCAATCCTGGTACGCAGGTATAGGCCTGGGATGTTCACAGGGCATTATGTCTTGTACCTGGGCTTTAGACTTTTGGTATGGTGGCAAGCTTATCTCACAAGGTTATATAAACGCAAAAGCAATGTTCGAGACCTTCATGATTTTGATCAGCACAGGACGAGTTATTGCCGATGCCGGAAGTATGACTTCGGACCTGGCCAAGGGTGCTGATTCAGTGGGCTCTGTTTTTGCAGTCTTAGACAAATACACTAAAATTGAGCCCCAAGACCCAGATGGGTGCCAGCCTGAGAAGATAACCGGCCACATCGAACTCCGGGATGTACATTTTGCGTACCCAGCCAGGCCCGACGTGATGATCTTCCAAGGATTTTCACTCAAAATCGATGCTGGGAAATCAACAGCACTGGTTGGCCAAAGTGGGTCTGGCAAATCAACCATTATAGGGTTAATAGAGAGATTCTACGACCCACTGAAAGGAACAGTGACCATTGACGGCAAGGACATAAGGTCGTATCAACTCAGAGCAGTGAGGAAACACATAGCGTTGGTGAGTCAAGAGCCGACGTTGTTCAGTGGGAGCATAAGAGAGAACATTGCATACGGAGCGTCGGATGAGGTGGGCGAAGCGGAGATCGTAGAAGCAGCGAGAGCAGCGAACGCTCATGATTTCATTGGAAGCCTGAAGGATGGATACGACACGTCGTGTGGGGACAGGGGGGTACAGCTGTCGGGAGGGCAGAAGCAGAGGATCGCGATCGCCAGGGCGATATTGAAGAATCCGACGGTGTTGCTGTTGGACGAGGCAACGAGCGCGCTGGACAGCCAATCGGAGAAGGTGGTGCAAGAAGCATTGGAGAGGGTTATGGTGGGGAGGACGAGCGTGGTGGTGGCCCACAGGTTGAGCACCATACAGAACTGTGATTTGATTTCTGTGTTGGATAAAGGCAAAGTGGTGGAGAAAGGGACCCATTCCTCTTTGTTGGCTAAAGGACCCACCGGAGCCTATCACTCTCTGGTGACTCTTCAGACATCGTCGCCGACCGCCGAACGCCGCTCCCTGCATTAG 3939 0.4874 MRWKSPGLFKPTKLPIFNRKPTQKRLANLESCTLARTKNVVVVVGKIKIMDGDQETSVAPSSSVTAKKNKNGSIRSIFMHADTEDWFLMVLGIIGSLGDGFTTPLVLLISSRLMNSVGSSSTLAPTSFSHDINKNAVNMLYLAAGSFVACFLEGYCWTRTGERQATRMRGRYLKAVLRQDVAYFDLHVTSTSEVITSVSNDSLVIQDAIAEKVPNFLMNVFMFIGSYIAAFALLWRLAIVGFPFVVLLVIPGLLYGRTLMGLARKIREEYNHAGTIAEQAISSIRTVYSFVGESKTIGAYSHALQGSVQLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSHLVMYHGAKGGTVFVVGAAMAVGGLSLGAALSNMKYFSEASTAGERIMEVIKRVPKIDSDNMSGEILESVSGEVEFAQVQFAYPSRATSIILSDFNLKIPAGKTMALVGRSGSGKSTVISLLQRFYDPLVGEIRLDGVAIHKMQLKWLRSQMGLVSQEPALFATSIKENVLFGKEDASMEEVIQAAKASNAHNFISHLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGKIMEMGSYDELTQNDDGLYTSLVRLQQTEQLKTQQEDTVSALSSISNRDMNNTSSRRLSLVSRSSSANSMARNPASVADEDDGHHVTEDKKFPVPSFRRLLALNLPEWKQAIMGCISAVLFGAVQPLYAFAMGSMISVYFLTDHDEIKRKTRIYVLCFLGLAIFSLLINISQHYYFAYMGEYLTKRVRERMLSRILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRMALLVQTCSAVTIACTMGLVIAWRLALIMIAIQPLIIACFYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSSQDRILKMLQKAQERPSKESVRQSWYAGIGLGCSQGIMSCTWALDFWYGGKLISQGYINAKAMFETFMILISTGRVIADAGSMTSDLAKGADSVGSVFAVLDKYTKIEPQDPDGCQPEKITGHIELRDVHFAYPARPDVMIFQGFSLKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGTVTIDGKDIRSYQLRAVRKHIALVSQEPTLFSGSIRENIAYGASDEVGEAEIVEAARAANAHDFIGSLKDGYDTSCGDRGVQLSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQEALERVMVGRTSVVVAHRLSTIQNCDLISVLDKGKVVEKGTHSSLLAKGPTGAYHSLVTLQTSSPTAERRSLH 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2008 1312 CDD ABC_MTABC3_MDL1_MDL2 1060 1300 - -
Alju01g2008 1312 Gene3D - 412 670 IPR027417 -
Alju01g2008 1312 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Alju01g2008 1312 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 650 IPR003439 GO:0005524
Alju01g2008 1312 FunFam Putative ABC transporter B family member 8 703 1048 - -
Alju01g2008 1312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1050 1300 IPR027417 -
Alju01g2008 1312 CDD ABC_MTABC3_MDL1_MDL2 414 652 - -
Alju01g2008 1312 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1060 1297 IPR003439 GO:0005524
Alju01g2008 1312 SUPERFAMILY ABC transporter transmembrane region 83 398 IPR036640 GO:0005524|GO:0016020
Alju01g2008 1312 Pfam ABC transporter 432 581 IPR003439 GO:0005524
Alju01g2008 1312 FunFam ABC transporter B family member 1 76 413 - -
Alju01g2008 1312 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 738 1025 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2008 1312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 652 IPR027417 -
Alju01g2008 1312 MobiDBLite consensus disorder prediction 689 713 - -
Alju01g2008 1312 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 90 379 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2008 1312 PANTHER ABC TRANSPORTER B FAMILY 54 795 IPR039421 -
Alju01g2008 1312 SUPERFAMILY ABC transporter transmembrane region 717 1045 IPR036640 GO:0005524|GO:0016020
Alju01g2008 1312 Pfam ABC transporter 1079 1228 IPR003439 GO:0005524
Alju01g2008 1312 CDD ABC_6TM_Pgp_ABCB1_D1_like 89 387 - -
Alju01g2008 1312 ProSitePatterns ABC transporters family signature. 1200 1214 IPR017871 GO:0005524|GO:0016887
Alju01g2008 1312 Gene3D ABC transporter type 1, transmembrane domain 139 1026 IPR036640 GO:0005524|GO:0016020
Alju01g2008 1312 CDD ABC_6TM_Pgp_ABCB1_D2_like 727 1043 - -
Alju01g2008 1312 SMART AAA_5 441 627 IPR003593 GO:0016887
Alju01g2008 1312 SMART AAA_5 1087 1280 IPR003593 GO:0016887
Alju01g2008 1312 FunFam ABC transporter B family member 4 404 661 - -
Alju01g2008 1312 FunFam ABC transporter B family member 4 1050 1307 - -
Alju01g2008 1312 Pfam ABC transporter transmembrane region 89 356 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2008 1312 Pfam ABC transporter transmembrane region 738 1008 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2008 1312 Gene3D - 1050 1310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2008 Alju-ChrAlju01 16748597 16756249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2008 50 1305 Calmodulin-binding Proteins AT2G36910 44.497 0.0 1068