Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1993 ATGGTCATAGCTAAATTCAATTTGATGTATATTACTTATTTAGTTCCGATCAGATCACCTCGGTTGGACCCCACCGGATTTTTTGAACCCCTCCCAGTCGCCGGCATAGGCTTGCCGACTTATCATCCAATTCGAGTTGGGACAGAGCGCGAATTCGCTGTCGTGCCGTGTAATCAAATGGTGGGAAGGAGGAAACCTCTGGTCCTCGCCTCTACCAAGCAGCTCATCAATTCTGTGCTCAGCTCATCACAACGTGGGGAAGCAACCCCTGGAGCTGGAGACAAGCTCTTCGATGACGGCTCTCCCAGGAATCTGCAGTTACCTGTCGGCATTCTCCGACTTTCCGAGGATGCAAACGAGAGACCAAAACCTCAATCGGCTGCTCTTGATGATTCTGCGTTGGTCGGCCTATCAACTTCGCTTTTGAGAAGGCTTTCTATAACTTCGGATTCACTGGTGCTTGTTAAGAATGTTGAGATGAACATTCAGAGAGTAGCTCAGGCAGTTGCCCTAGATCCTCCTGGCAGTGATGAGTGCACATCTGATGTTAAATTGCCCTCCCCCTGTATAATGCTTGTGTTTCCTTCTTGTGCTTTCCCTAATGGGGGCGTGTTAGATCATGAAGTCGCTTATATATCTCCTCTCTTAGCTTTCAACCTCGATTTGCACATAACATGCTTAGAATCCGTTCTACACCAAGGGGAAGAGGTATTAGCCCCTTATTTTGATCCAAAAGTGGACGACGAGGCTACTGCAAAAAGATGTGAGACTTCTGTCATTGATATAGAATTGGGACCTTTGGTTCAAGCTCCTAGGTATGCTTCACATCTAAAGGTTTCTTTTGTGAAGATACCAGAATGTGGTACCCTTGAAACTCTCAGAGGAAGTTCACCTATGGAATCAGAAGACCGCCAAAATATGATTGATTCAGCATTACAAAAATATTTTCAAGTCGATAGATATTTGGCAAAAGGAGATATCTTTGGCATCAGAATAAATTGGAACTGCAATTCCATTCTATGTATTCCTTGCAACCAAAAAGCACAAAAGAAACATGGAAATCTTATCTATTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAATTCTTCTTGTCAATCGAGTTTCAACTGCTTTGGTTCTTGGAGGGAGCATCCCTTCTACTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAACCTGTGCCTTTACAAAGGGACATAGTAAAAGTTTTGGCTTCAGTACTTACACCAGCTTTCTGTCCATCAGCACTTGCTTTAAAATTCAGAGTTTCAGTTCTATTGTATGGCTTAGCAGGTTGTGGGAAGCGGACTGTTGTTAGATACGTTGCTCGTCGGTTGGGCATGCATGTGGTGGAATATAATTGTCATGATTTAACATTGTCAGAGAGGAATACATCTATAGCACTAGTTCAAGCTTTCAAAACAGCACGAAGATACTCACCAACTATACTTATTCTCCGTCATTTTGAAGTTTTCCGAGACATGCAAGTTCTTGAGGGTCCAGCAAATGATCAAAGAGGCAATACATCTGAAATTGCATCAATTATTAGGAAATTCACAGAGCCAGTGAAAAAAGATGGTGGCATATACTCCCATGAGAAACCAAATGGTGAATTTGGTGAGAAGAGTGCTGACAATACCAGTGGGCATCCGATCTTGTTGATTGCAACTGCAGTTAGTTCAGAAGGTCTGCCTTCAACTATCAGACGATGCTTCAGCCATGAAATAAAAATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATCCCAGTCACTGCGAAGTGTCATCTCTAATACTGATGCTGAGAGTTTTACAAAAGAAATTGTTGGGCAGACATCTGGTTTCACGCCCAGAGACATGCGTGCTTTGATTGCGGATGTTGGTGCAAACTTATTTTCTAAGAGTTTTGATGCTGCAGACCAAGCTAGGCCTAAAGATATTGATGGTTCTTGTAGTTCTGAAGTGATGCAGGACAACAACCACTTGAAAGTTCCACAAGAGGTTCAAGAAGTCAAAGAACACTTGGCTAAAGCTTTGGAACGATCAAAGAAAAGAAATGCTGCTGCATTGGGTGCTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTGAAAAAATCAATACTAGATACTGTTCAGTTGCCTCTCCTGCATAAGGAGCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCCCCAGGAACTGGCAAAACATTATTGGCCAAAGCTGTGGCCACAGAATGTTCCTTGAATTTTCTTAGTGTGAAAGGGCCTGAACTAATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCAAGATCATCACGACCATGTGTTATCTTCTTTGATGAGCTCGATTCTCTTGCTCCAGCCCGGGGCGCTTCTGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTGGCTGAGATTGATGGCCTGAATGATTCTGCGCAGGATCTCTTTATCATAGGTGCAAGTAACAGGCCAGACTTGATAGACCCTGCACTTTTACGCCCGGGCAGATTTGATAAACTGCTGTATGTTGGAGTTAACTCTGATGCATCTTACAGAGAGAGGGTCCTTAAAGCACTTACCAGAAAGTTTAAATTTTCTGAAGACCTGTCGCTTTACTCAATAGCTAAAAAGTGTCCGCCAAACTTTACTGGTGCAGACATGTATGCCTTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGGTTTTAAGTGCAGATCCAGAGTCTTCCGGTAAGGAGGATGACGCAGACTCTGTTATTGTTGAGTACAATGATTTTGTCCAGGTCTTGGTGGAGCTGACGCCTTCTCTGTCCATGGCTGAGCTTAAAAAGTACGAGCAGCTGAGAGATCAGTTTGAAGGCAAATCAAAATAA 2985 0.4365 MVIAKFNLMYITYLVPIRSPRLDPTGFFEPLPVAGIGLPTYHPIRVGTEREFAVVPCNQMVGRRKPLVLASTKQLINSVLSSSQRGEATPGAGDKLFDDGSPRNLQLPVGILRLSEDANERPKPQSAALDDSALVGLSTSLLRRLSITSDSLVLVKNVEMNIQRVAQAVALDPPGSDECTSDVKLPSPCIMLVFPSCAFPNGGVLDHEVAYISPLLAFNLDLHITCLESVLHQGEEVLAPYFDPKVDDEATAKRCETSVIDIELGPLVQAPRYASHLKVSFVKIPECGTLETLRGSSPMESEDRQNMIDSALQKYFQVDRYLAKGDIFGIRINWNCNSILCIPCNQKAQKKHGNLIYFKVIAMEPSDEPILLVNRVSTALVLGGSIPSTLPPDLLIAGPEEPVPLQRDIVKVLASVLTPAFCPSALALKFRVSVLLYGLAGCGKRTVVRYVARRLGMHVVEYNCHDLTLSERNTSIALVQAFKTARRYSPTILILRHFEVFRDMQVLEGPANDQRGNTSEIASIIRKFTEPVKKDGGIYSHEKPNGEFGEKSADNTSGHPILLIATAVSSEGLPSTIRRCFSHEIKMGPLTEEQRAEMLSQSLRSVISNTDAESFTKEIVGQTSGFTPRDMRALIADVGANLFSKSFDAADQARPKDIDGSCSSEVMQDNNHLKVPQEVQEVKEHLAKALERSKKRNAAALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKELFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKFSEDLSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKVLSADPESSGKEDDADSVIVEYNDFVQVLVELTPSLSMAELKKYEQLRDQFEGKSK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1993 994 MobiDBLite consensus disorder prediction 81 102 - -
Alju01g1993 994 FunFam Peroxisomal biogenesis factor 6 706 895 - -
Alju01g1993 994 SMART AAA_5 744 884 IPR003593 GO:0016887
Alju01g1993 994 SMART AAA_5 430 591 IPR003593 GO:0016887
Alju01g1993 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 645 IPR027417 -
Alju01g1993 994 ProSitePatterns AAA-protein family signature. 851 869 IPR003960 GO:0005524|GO:0016887
Alju01g1993 994 Gene3D - 706 983 IPR027417 -
Alju01g1993 994 Gene3D - 403 611 IPR027417 -
Alju01g1993 994 PANTHER AAA-FAMILY ATPASE 127 991 - -
Alju01g1993 994 Coils Coil 979 994 - -
Alju01g1993 994 Gene3D - 882 968 - -
Alju01g1993 994 FunFam Peroxisome biogenesis protein 6 403 588 - -
Alju01g1993 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 988 IPR027417 -
Alju01g1993 994 CDD RecA-like_PEX6_r2 720 879 IPR047533 -
Alju01g1993 994 FunFam Peroxisome biogenesis protein 6 882 968 - -
Alju01g1993 994 Pfam ATPase family associated with various cellular activities (AAA) 434 587 IPR003959 GO:0005524|GO:0016887
Alju01g1993 994 Pfam ATPase family associated with various cellular activities (AAA) 748 880 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1993 Alju-ChrAlju01 16561404 16570967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1993 714 939 Calmodulin-binding Proteins AT3G56690 38.767 4.89e-39 155