Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1972 ATGTTGACAGGAGAAGGTGTCGCCATGAATTCTACGTTGAACTCCATTGTCTCTACAATGGGGTCTGAAGTAGACGCTTCTGTAAATTCCATTACTCTATTTGTTGTTCTTCTTCTTGTTTGTGTTGTGATTGGACATCTTTTGGAAAAGAGTCGCTGGATGACTGAGTCAATCATTCCATTATTCATTGGCCTTGTCAGTGGAACCATCATTCTACTAACAACTAAGGGGAGAAGTTCACACATTTTTGTATTTAACGAAGAGCTTTTTTTCATATATCTTCTTCCACCTATCATATTTAATGCGGGGTTCCAGGTGAAAAAGAAGCAATTTTTTAAGAACTTTGTGGCAATAAATTTGTATGGTGCTATTGGGACTATGATATCATTTGCCATCATATCACTAGGTTCAATGCATTTATTCAAGGGATTAGACATTGGTGTGTTGGAACTGAGAGATTATATTGCACTAGGAGCAGTACTTTCGGCTACCGATTCAGTCTGCACATTGCAGGTGCTTGATCAGGAAGAGACGCCTCGTCTGTACAGTTTAGTTTTTGGTGAAGGTGTTGTGAATGATGCAACATCAGTGGTTCTTTTCAATGCAATCCAAAGAATTGATCTCTCTCATATCACCTCAGCCACTATATTGCAGTTTTCTCGCAATTTCTTTCGTTCATTCGGGGCAAGCACCTTTCTTGGACTAACAGTTGGCTATTTTAGTGGATTGATTATAGAGAAGTTGCGTTTAGCCAGGCATTCTACAGATCGAGAAATTGCTGTTATGTTCCTGCTGGCTTATTTATCTTATATGTTGGCTGAACTTGCTGACCAAAGTGGGATCCTTACCGTGTTCTTTTGTGGGATTGCCATGTCACACTTCACTTGGCCTCATGTTTCTGATTGTTCTAAAGTTACAAGCAGGCATGCTTTTGCAACTTTCTCATATCTCGCTGAGATTTTTATCTTCCTATATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAAATTTGCCAGCAGGAGTCCTCGTACCTTAGCTGGGGCAAGTGGAATGCTGCTAGGCTTGGTTATGCTCGGAAGGGCAGCTTTTGTGTTTCCTCTCTCATTTTTAGCCAATTTAATTATGAGTTCTGATAACCAGATTTCATTCAAGCAGCAGGTTTTGATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCTATGGCACTTGCATACAATCAGTTTACTAGATCAGGACACACACAGCTGCAGGGGAATGCCATCTTGATTACCAGCATCATCATAATTGTTGTATTAACTAATACGGTTGGAGGATTATTGAGCAAGCCTCTGTCGCGGCTATTGTTGAAGCATTCAGACAGCTCAACGGATTTAGAATCTGTTCATAGTAATGGTTTGACTGCGCAGTTACTCTCCATCGGCCACGGTTCAGAATTTAACAGGGACAACGGGAGAGGATTCGCTCCTGTTACTCCCAATTCCGCAACAGACATGATTCTACGTTAA 1509 0.4148 MLTGEGVAMNSTLNSIVSTMGSEVDASVNSITLFVVLLLVCVVIGHLLEKSRWMTESIIPLFIGLVSGTIILLTTKGRSSHIFVFNEELFFIYLLPPIIFNAGFQVKKKQFFKNFVAINLYGAIGTMISFAIISLGSMHLFKGLDIGVLELRDYIALGAVLSATDSVCTLQVLDQEETPRLYSLVFGEGVVNDATSVVLFNAIQRIDLSHITSATILQFSRNFFRSFGASTFLGLTVGYFSGLIIEKLRLARHSTDREIAVMFLLAYLSYMLAELADQSGILTVFFCGIAMSHFTWPHVSDCSKVTSRHAFATFSYLAEIFIFLYVGMDALDIEKWKFASRSPRTLAGASGMLLGLVMLGRAAFVFPLSFLANLIMSSDNQISFKQQVLIWWAGLMRGAVSMALAYNQFTRSGHTQLQGNAILITSIIIIVVLTNTVGGLLSKPLSRLLLKHSDSSTDLESVHSNGLTAQLLSIGHGSEFNRDNGRGFAPVTPNSATDMILR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1972 502 PANTHER SODIUM/HYDROGEN EXCHANGER 24 453 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Alju01g1972 502 Gene3D - 150 202 - -
Alju01g1972 502 Pfam Sodium/hydrogen exchanger family 34 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Alju01g1972 502 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju01g1972 502 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju01g1972 502 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju01g1972 502 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1972 Alju-ChrAlju01 16345879 16349177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1972 7 498 Antiporters AT3G05030 56.238 0.0 586