Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1964 ATGAGCGCATATGAAGTAGTGCTTGACAGTGAGGATGAAGAAATGCACGGCGGTAAAGTTGTGACTGTTTCCAAAGGGTTATTGGATAAAAATGTTTATCGAACCGTTAAAAATCCTAGAATAAAGTTCCAGGAGAGGCATCTTGGGCCACCTTCACCTAGTAAGCAAGTGGAGAAGGGAGCAGCAAACACAAGTGTCCCTTCTCTTTGGAAATCTGCTACTGGGCACAAAGAAACATCAACTGACGCTGAGAACTCTGGTAACAAAAATCATCTACATTCAGCTACAAAGTTGAGTCAAATACCCTCTCCAGAGATTGGGGAATTAACCCAAGACGATGCACTGGGATATGTGGATCACTACTTGTCAGACAACAAAGTAGAATTATCTCCAGGAATTTGCCATAGAAAGGCGACTAGAGAGAAATCACCACCTCTAATGAGTGCAAGAGGAGCACAAAATTTGGCCAAGAAAATTCAAGATCAGATTCGTCATAAAGAAAAAAGACCCTTCGAATTGGTTGACGCTGGTCAAAAGGACACAGGAGCTGGGATTTTTCATAAAAGGATTGCGGTATCTTCTAATTTTGGGGTCTGTGGACAGACATACACAAGACGAAAACAGAAAAGTGGTTATCATGATAACCGAGAAACCTGTGGCACAGGTAATGGATGCGAAGAGAAGTTAGCTCAAGGACTAGGAACAGTTGCTGAGAATAACTCTATCAAGGAGCTGGATGTTCAGTCAGATGCTGCAGGAAAGAATGTTGACGCTTATTCTGGTGTGGAACATACCGAGAACACCTCTGATATTGGTTTAGACACCCAGGTAGCTGTTGAAGCTATGGAGGCCTTAGCTTATTTGCCCCCTCCTGATGGCAGATGCACTAGGATCAAAGATCAATCAAGCAAACAAAGAAAGAGGAATAATAATTTTGTAGATGGAGGTATTGTGAGATCCAAAAGGAAAAGGACTGGTTTAACAGCTGATCCATTCAAGCTGGTTTGTGAGACAGAATATCTTAAGAAGCCTTCGAGTTTATTTGGGATGGCTATGAAGAACAGTTTAAATTATCAGGTACAAGTTTGTCCACGGCTGTCCACTAGCAGCAGTTTTTCAAGTCTTAAATCATGGCATTATCCAAAAGGACCAAGAGGGAAAAGAAAATGTCCTGATGTAAAATGCTATCCAGCTGCGCCTAGAAATTGGGGTACTCAGTCTATCATTGTCAATGGAAATGAAAGTAGTATCATCTCTATCGCAAATCACATTCAGAGGGATGCAGAAGGCCAAGATATTGAGAACGAAGCATGTTTTCCTAACATCCATCCACTGTATAATGCTAAATGTATCGGCACTGGCACCATCAGTGCAGGCAGAGAGGTTCCAAATGCCAATGCTACTTGCTATAAGAATCACAAAAAGCCAAGTAACAAAAACCTGCCAAAATCCTACCGTTTAAAGGAGCTTATTAGATTAGGCATTTCTGAGTACGCGCCAGATCTGATAGGGAAAAATCTGAGGCAACGAAAAGATATGTCACATGTTCGAGTTCTGTTAAGCCAGCATTTGGATGAGAGTATCATAAAGCATCAAAAGAAGATCTTGGCACGGATGAACATGTCTCTTGCATCAAGCCCTATGGAGGCCACACATTTTGTAGCAGACAAATTCACACGTACAAAGAATATGTTGGAAACCATGGCTCTTGGTAAATTGGTGGTGACGCATTTATGGCTTGAGAGTTGTGGACAGGCCAACTGTTTAGTTGACGAGAAAAATTATATTCTAAGAGATGTGAAAAAGGAAAAGGAGATGGGCTTTACCATGCCTGCTTCTCTTGCTCGAGCAAAACAGCAACCACTTCTACAGGGTAAATGTGTCTTCATAACCCCTCACATTAAACCTGATAACATAGTGATCACAAGCTTAGTCACAGCTGCTCACGGTCAGTTGGTGGATGAAAGCCAGATTCATGCATGCAAGAATGATAAGATGTTAAATAATCTGTTGATCATTTCTAGCGAAGAAGACCGTGAAGTATGCCGCCTGTTCTTTCAGAGAGGAATTGCTGTTTACGGTTCGGAGCTTCTTCTGAGTGGAATAGTGACCCAGAAACTGGAATTTGAGAGACATCAACTCTTCGCAAATCAGGTTGCAAGGAAATGCCTCGGTACATCAAACCGTCGTTTTGGGAAGGTCTACAGAAGGCGGCGCAACCTGTATGTGGATCAAATTCACAGCTGA 2247 0.4215 MSAYEVVLDSEDEEMHGGKVVTVSKGLLDKNVYRTVKNPRIKFQERHLGPPSPSKQVEKGAANTSVPSLWKSATGHKETSTDAENSGNKNHLHSATKLSQIPSPEIGELTQDDALGYVDHYLSDNKVELSPGICHRKATREKSPPLMSARGAQNLAKKIQDQIRHKEKRPFELVDAGQKDTGAGIFHKRIAVSSNFGVCGQTYTRRKQKSGYHDNRETCGTGNGCEEKLAQGLGTVAENNSIKELDVQSDAAGKNVDAYSGVEHTENTSDIGLDTQVAVEAMEALAYLPPPDGRCTRIKDQSSKQRKRNNNFVDGGIVRSKRKRTGLTADPFKLVCETEYLKKPSSLFGMAMKNSLNYQVQVCPRLSTSSSFSSLKSWHYPKGPRGKRKCPDVKCYPAAPRNWGTQSIIVNGNESSIISIANHIQRDAEGQDIENEACFPNIHPLYNAKCIGTGTISAGREVPNANATCYKNHKKPSNKNLPKSYRLKELIRLGISEYAPDLIGKNLRQRKDMSHVRVLLSQHLDESIIKHQKKILARMNMSLASSPMEATHFVADKFTRTKNMLETMALGKLVVTHLWLESCGQANCLVDEKNYILRDVKKEKEMGFTMPASLARAKQQPLLQGKCVFITPHIKPDNIVITSLVTAAHGQLVDESQIHACKNDKMLNNLLIISSEEDREVCRLFFQRGIAVYGSELLLSGIVTQKLEFERHQLFANQVARKCLGTSNRRFGKVYRRRRNLYVDQIHS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1964 748 MobiDBLite consensus disorder prediction 41 104 - -
Alju01g1964 748 MobiDBLite consensus disorder prediction 57 104 - -
Alju01g1964 748 Gene3D BRCT domain 504 620 IPR036420 -
Alju01g1964 748 Coils Coil 149 169 - -
Alju01g1964 748 ProSiteProfiles BRCT domain profile. 508 597 IPR001357 -
Alju01g1964 748 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 54 306 - -
Alju01g1964 748 SUPERFAMILY BRCT domain 509 613 IPR036420 -
Alju01g1964 748 CDD BRCT_MDC1_rpt1 527 590 - -
Alju01g1964 748 MobiDBLite consensus disorder prediction 298 317 - -
Alju01g1964 748 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 508 597 IPR001357 -
Alju01g1964 748 CDD BRCT_PAXIP1_rpt6_like 622 708 - -
Alju01g1964 748 Gene3D BRCT domain 621 722 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1964 Alju-ChrAlju01 16241064 16244183 Dispersed/Wgd