Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1955 ATGATGAGGCCTACTTTCGTCTTACTCGGTTGTGTCCTAATTTCTGCTTCTCTTGTGGTTGCACAAGGAGGCGACCTCACCAAGAACTTCTACCGAACAACCTCTTGCCCTCAAGCAGAGGACATCATCAAAACAAGAATCACACAGCTTGTCTCTTCCAATCCTGCTTTGCCTGCCCAGTTGCTGAGATTGTTCTTTCACGACTGCTTTGTTAGGGGATGTGATGCATCAGTGCTGTTGAACTCCACTGCTAATAATATAGCAGAAAGGGACTCGATCCCAAACCTGACTCTGAAAGGAGGCTTTCAGGCCATTGATGACATAAAAGCAACCGTGGAGGCTCAATGCCCAGAAGTTGTTTCCTGCGCTGACATCCTCGCATTGGCCGCTAGGGACGCCGTTTCCATCCCTTTCAAGAAACCTTTATGGGAGGTGCTTACTGGTAGAAGAGATGGGAGAGAATCGATAAGCCGAGAAGTATTTGGGAATATTCCGGCACCGTTCTTCAACTTCACTCAACTCAGAACCAACTTCGCCAACAAAGGCCTGACGGTGCACGAGCTGGTGGTGTTGTCAGGCGCTCACACTATCGGAATAGCACACTGCAACTCCTTCAGCAGCAGGCTCTTCAACTTCACCGGAAAAGGAGACCAGGACCCTTCTCTGGACCCCACCTACGCTGCCTTCCTCAAGTCCAAATGCAAAGGCCTCAGAGACACCACCACCATCGTGCCAATGGATCCCAACAGCTTCACCTCCTTTGACTCTCACTATTACTCCAACCTTGTCCAGAACAAGGGACTGTTCCAGTCTGATGCTGCTCTTTTGACTGACAAGCATGCAGCGAAGAGTGTCAATGAACTGATTGACAAGAATGATTTCTTCACAGAGTTCGCGCAAGCCATGAAGAGGCTCGGAAACATTGAGGTCCTCACTGGCACCACTGGAGAAATCAGGAACAAATGTTGGGAGGACGAAATGGATGGATCCCTCAGGCTTCGAAGCTTAGTTCTGCTGCAACAGTGGCACAGGCACTTGGACTGCCACAATTTAACCCAACCCATTAAAAGCCGACGCAATGCTCTTCGCCAAAGCATAATTGCAATCCTCCTCTTCCTCTTTGGCATCCTATTCCCGATAGGCAAGGGTACTTTTCTTTTTGCTTAG 1167 0.4919 MMRPTFVLLGCVLISASLVVAQGGDLTKNFYRTTSCPQAEDIIKTRITQLVSSNPALPAQLLRLFFHDCFVRGCDASVLLNSTANNIAERDSIPNLTLKGGFQAIDDIKATVEAQCPEVVSCADILALAARDAVSIPFKKPLWEVLTGRRDGRESISREVFGNIPAPFFNFTQLRTNFANKGLTVHELVVLSGAHTIGIAHCNSFSSRLFNFTGKGDQDPSLDPTYAAFLKSKCKGLRDTTTIVPMDPNSFTSFDSHYYSNLVQNKGLFQSDAALLTDKHAAKSVNELIDKNDFFTEFAQAMKRLGNIEVLTGTTGEIRNKCWEDEMDGSLRLRSLVLLQQWHRHLDCHNLTQPIKSRRNALRQSIIAILLFLFGILFPIGKGTFLFA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1955 388 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Alju01g1955 388 FunFam Peroxidase 165 305 - -
Alju01g1955 388 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 Pfam Peroxidase 45 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Alju01g1955 388 SUPERFAMILY Heme-dependent peroxidases 32 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 FunFam Peroxidase 29 169 - -
Alju01g1955 388 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 PANTHER PEROXIDASE 25-RELATED 15 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g1955 388 Gene3D Peroxidase, domain 2 165 306 - -
Alju01g1955 388 Gene3D - 30 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1955 Alju-ChrAlju01 16171662 16175890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1955 26 322 Peroxidase AT1G05260 54.000 2.97e-108 319