Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1939 ATGCTTCTTAGCAATAAGTCAAAATGTGGTCAAAATAGCTGGCTGGCTGCCCCATTTGCCCCTAAGCCACCATGGCTATCATCTTCTCCTCTCTTCATCATCTCAAGTCAAACTCAAAGCAATCATCTTCTTCTCTCTCACTCTCAACCCTTCACCTCCAATTCTAAGCTTCTTCCTCTTCCCTCTCATCCCTCTGTCCACCCTCAACCCTCCTCCTCCATGTCCCTCTTCTTCTTCTTCTTCTTCTTTGTTTCCCTCTCTTTCCCACTTTCTTCCCTCTCTGCAAACGACACCGGTCTCAATGCTCACTGCCCTCTCAACTTCACTGTCCTCAATGTTGTCGCCGGTGGCGACCAACCCTCTCTCGACTCCAGCACTGTCTGCGAGTTCTCCCGCTCCTCCATCCGTCTCGTTCTCTCCGATTACCTCCACCGCACCGGCTTCTTCCTTCCGCCTCTCAACTCTTCCGACACCTGCTGGGATAATTTCCAGAAATTCATCAATCAATACCGCCCCAACCTCGACGTTCGCGCCACTTGTGGCTTCCAAACAACCTGGATCTCCCAGGGATGCCAGAACATCACCACTAAAGATGATTTCGTCTCCCAGATTCCGTCCTCGGCGATTCAGGACGCCTACCGGAATTGCAATCAGTCGCTCGAAAATAACTCCCCCTGTGCCCTCTGTACCACGAGCTTGTCGGCTATGCAACCCTCCGTGAAAGGAAATTCGACCGGAAACGTCTCCGATTGTACGTCCTATCCCCAAATTTACGCCGCCGCCTTTGCCAATCAGGCTGGACCCACCGACAGAGGCGTTGCCCAGTGCATTTTCCTTCTGAGCTTCCATCCGCCAGGTTCCACCGGTAATAAACGAACGGTTGTTACTGTAGTGACTGTGATTGTTTGTTTATTGGCTTTGTCGCTGGTGATTGTTGGGCTCTGGCTTCACCGAAGATCGAAGAAGAAGGGCAAGAGGGGTATTAGTAAAACTGAAATGGGTGTTGTCGTGTCTGGGTTGGATTCTATGAAGGAGAGCACCACTTTGATCAGGTTTACATTTGATGACATCAAGAAGGCGACCAGAAACTTCTCTAGGGATAACATAGTAGGTAGAGGGGGATATGGAAATGTGTACAAAGGGTTACTCCCAGATGGAACTGAAGTTGCATTGAAAAGGTTCAAGAACTGTTCTGCTTCAGGAGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCCAGTGTTAGGCATGTGAATTTAGTTGCTCTGAGAGGTTATTGTACAGCCACAACTAATTTAGAGGGTCACCAGAGGATTATCGTTTGTGATTTGGTGAAGAATGGGAGTCTTCATGATCATTTATTTGCTTCTTCTGGAAAGAAACTCAGCTGGCCAGTCCGTCAACAGATTGCACTGGGAACTGCTAGAGGATTGGCTTATTTACACTATGGAGCTCAACCTTCCATTATCCATAGGGATATTAAAGCAAGTAATATACTTCTGGATGAGAAGTTTGAAGCCAAAGTTGCAGATTTTGGACTTGCTAAGTTCAATCCAGAGGGAATGACTCATATGAGCACACGAGTAGCCGGAACAATGGGGTATGTTGCACCAGAGTATGCATTGTATGGGCAATTAACAGAGAGAAGTGATGTGTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAGAAGGCTCTTCAAATGAACGAGGATGGCCAGCCTTCATCTTTGAGTGACTTGGCCTGGTCATTGGTTAGGGCAGGTAGAGCTTTGGATGTGATTGAAGATGGTATGCCTGAATCGGGTTCACCAGAAGTGCTTGAGAAGTATGTGTTAATAGCTGTTCTTTGTTCTCACCCTCAGTTATATGCAAGGCCAACAATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTACCATCAATACCTGAACGGCCAATTCCTCTAGTTGCTGGAAGGCTTGATATTGTGAGATCCGCTGGTAGCTTTGGTGGCTCCGGCCAGCTCTCTAGTCCAACAGGTTATCGATCATTTGCATATGAAAGTGAGTGCCATTCTTCTAATTCAAAGGAAGAAGAAGGAAGTTCGGACTCAAGAATACTGAGTACATAA 2127 0.4716 MLLSNKSKCGQNSWLAAPFAPKPPWLSSSPLFIISSQTQSNHLLLSHSQPFTSNSKLLPLPSHPSVHPQPSSSMSLFFFFFFFVSLSFPLSSLSANDTGLNAHCPLNFTVLNVVAGGDQPSLDSSTVCEFSRSSIRLVLSDYLHRTGFFLPPLNSSDTCWDNFQKFINQYRPNLDVRATCGFQTTWISQGCQNITTKDDFVSQIPSSAIQDAYRNCNQSLENNSPCALCTTSLSAMQPSVKGNSTGNVSDCTSYPQIYAAAFANQAGPTDRGVAQCIFLLSFHPPGSTGNKRTVVTVVTVIVCLLALSLVIVGLWLHRRSKKKGKRGISKTEMGVVVSGLDSMKESTTLIRFTFDDIKKATRNFSRDNIVGRGGYGNVYKGLLPDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVCDLVKNGSLHDHLFASSGKKLSWPVRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQMNEDGQPSSLSDLAWSLVRAGRALDVIEDGMPESGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVAGRLDIVRSAGSFGGSGQLSSPTGYRSFAYESECHSSNSKEEEGSSDSRILST 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1939 708 MobiDBLite consensus disorder prediction 686 708 - -
Alju01g1939 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Alju01g1939 708 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Alju01g1939 708 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 207 703 - -
Alju01g1939 708 SUPERFAMILY Protein kinase-like (PK-like) 342 639 IPR011009 -
Alju01g1939 708 SMART serkin_6 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1939 708 Gene3D Transferase(Phosphotransferase) domain 1 445 647 - -
Alju01g1939 708 ProSiteProfiles Protein kinase domain profile. 364 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1939 708 Gene3D Phosphorylase Kinase; domain 1 330 443 - -
Alju01g1939 708 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 326 443 - -
Alju01g1939 708 CDD STKc_IRAK 370 639 - -
Alju01g1939 708 Pfam Protein kinase domain 365 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1939 708 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 445 646 - -
Alju01g1939 708 Pfam SPARK 101 249 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1939 Alju-ChrAlju01 15989204 15991330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1939 80 694 Receptor kinase-like Gene Family AT2G48010 63.371 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Alju01g1939 Pkinase 6.1e-42 CL0016