Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1915 ATGACCATATCTATGGTAATCAGCAGACTAACACAACCCCTAATAAATATTTCTTCTGTTAGCCCAAAAATAAATGTTACCACTCTCCCGCGGCAGAAGGAGAAGGTTGTGTTGGTGATGGGGGCCACCGGCGCCGGGAAGTCCAGGCTATCCATCGACCTCGCCACCCGTTTTCCTGCGGAGATCATCAACTCTGATAAAATGCAAGTGTACGAAGGACTCGACATAGTGACAAACAAGATCACCGAGGAAGAACAGAGAGGTGTTCCTCACCATTTACTAGGAACACAGAATCCAAACTCGGAATTCACGGCGAGCAATTTCTGTGACATGGCTTCACTTGCCATTGAGACAATTAGGAGTCGTGGAAAGCTTCCGATCATCGTCGGAGGCTCGAATTCGTTCCTGGAGGCTTTAATCGACGACGACGACTATAAATTCCGATCGAGGTACGATTTTTGTTGCCTCTGGGTAGACGTGCTCATGCCCGTTCTTCGTACGTACGTTGCAGAACGGGTGGATCAGATGTTCAAGAAAGGAATGGTGAACGAATTGAGGCCTTTCTTCAACCCAAAAGGGGACTACTCACGAGGGATCAGGAAGGCCATCGGGGTTCCAGAATTCGACAGATATTTCCGAAGGGAAGCACAGGAGGATGAGGAAACGAGGCAGAGGCTGTTGGAAGAGGCGTTGAGGGAGATGAAGGAGAACACGCGGAAATTGGCGGGAAAACAGCTGGGCAAGATCCACATCCTGAAGGACGTGAGGAGATGGAAGATACAGCGCGTTGATGCGACGTCGGTGTTCCGGAAGCGCGGGGAAGAGGAGGAGGCGAATAAGGAGTGGATGAAGACGGTGGCGGAGCCAAGTGCGATGATCGTCGCTCAGTTCCTTCGCAACTGGACAACGACGAAGAGCGGCGTGCCCGGCGGGCTAAGATTGGTGTCGCTGGAGAGCGCCATTGCTTCGTCTTCTCATCTTCAACCAGTGTGCCCTGTCTGA 1002 0.517 MTISMVISRLTQPLINISSVSPKINVTTLPRQKEKVVLVMGATGAGKSRLSIDLATRFPAEIINSDKMQVYEGLDIVTNKITEEEQRGVPHHLLGTQNPNSEFTASNFCDMASLAIETIRSRGKLPIIVGGSNSFLEALIDDDDYKFRSRYDFCCLWVDVLMPVLRTYVAERVDQMFKKGMVNELRPFFNPKGDYSRGIRKAIGVPEFDRYFRREAQEDEETRQRLLEEALREMKENTRKLAGKQLGKIHILKDVRRWKIQRVDATSVFRKRGEEEEANKEWMKTVAEPSAMIVAQFLRNWTTTKSGVPGGLRLVSLESAIASSSHLQPVCPV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1915 333 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 298 IPR039657 -
Alju01g1915 333 Pfam IPP transferase 148 246 - -
Alju01g1915 333 Pfam IPP transferase 69 142 - -
Alju01g1915 333 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Alju01g1915 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 144 IPR027417 -
Alju01g1915 333 FunFam Adenylate isopentenyltransferase 5, chloroplastic 33 185 - -
Alju01g1915 333 Gene3D - 33 298 IPR027417 -
Alju01g1915 333 Coils Coil 213 237 - -
Alju01g1915 333 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1915 Alju-ChrAlju01 15752254 15753255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1915 149 307 C2H2 Transcription Factor Family AT2G27760 31.183 1.31e-18 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1915 01 15752254 15753255 Alju03g2904 03 54498365 54499378 CCT
Alju01g1915 01 15752254 15753255 Alju01g1915 01 15752254 15753255 ECH