Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1914 ATGGAAGGACAAAGTAACCGAGAGAAACATCCAAAGATGACGCCGCTTAACCCTGGAGGTAGTAGTAACCGTGTGGGTCATTCAGCTGAGGATTTCGCTGCGCAGTATGGGAATGTGAACCAGGAAAATTTCCTCCCTGAACCGTTTCATAATTATGTTGAGTATCTTACAGAAGCCTCGCCATATCTTCCTAATGTTACTGCCGATTATGCACTCGGGAGCTTACCCAATGTTAATGGGTTCAATAGAACAGACACAAACTTCTTCTACAATGATCCGGGAAAAGCATTTTGTTTTAAAGCTTCTGATGCTTCTGCTGGGACTGACTTCAGGAAGGTGGGGTTTTGGGGACCAAATAGTGAAGGCCACCGATCCAAGAAATTTGCAGCTAGCCAACTAAATCATCATGCTGAGGGCCAGGCTCCGTGGAGGGCAGAATCAACTGGAGATAAACATTCTGCTTCAAAACTTGATCCAAGGGTAACAGTACCTGAACCTGGTTTCATTCCCAAATCAAGAAGTAGTACATCAAAAGAGAAAGCGACTACAACTGACCGTCAACGCAGGCAACGTATTGCTGATAACCTTAAAGCTTTGCACGGCTTGCTACCAGCTCCATCTGAGGGTTGCTCGGCATATATACTGGATGACATTATTGACTATGTCAAATATTTGCAGCTTCAAATAAAGGAATTAAGTGGAAGAAGATTGCAAGGTGAATCAACTGCTTTGCCACTCACATTCCGCGAGGGTTATGGCCACTATATTAACCAGCAGATGCTGAATGAACCTCTTGAGGAGATGATGGGAAAACTGGTTGAGGAAAATCCAGCAGCAGCAGCACAGATGTTAGAGAGCAAGGGCCTTTTTATGTTGCCTTTGTCTTTGGCTGAAGACTTGCGCCTGTCTATGCAGATGTTTGGTGGCGTTCCTCGAGTCTAA 942 0.449 MEGQSNREKHPKMTPLNPGGSSNRVGHSAEDFAAQYGNVNQENFLPEPFHNYVEYLTEASPYLPNVTADYALGSLPNVNGFNRTDTNFFYNDPGKAFCFKASDASAGTDFRKVGFWGPNSEGHRSKKFAASQLNHHAEGQAPWRAESTGDKHSASKLDPRVTVPEPGFIPKSRSSTSKEKATTTDRQRRQRIADNLKALHGLLPAPSEGCSAYILDDIIDYVKYLQLQIKELSGRRLQGESTALPLTFREGYGHYINQQMLNEPLEEMMGKLVEENPAAAAQMLESKGLFMLPLSLAEDLRLSMQMFGGVPRV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1914 313 CDD bHLH_AtbHLH_like 184 233 IPR045239 -
Alju01g1914 313 MobiDBLite consensus disorder prediction 132 189 - -
Alju01g1914 313 Gene3D - 173 243 IPR036638 GO:0046983
Alju01g1914 313 MobiDBLite consensus disorder prediction 1 27 - -
Alju01g1914 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
Alju01g1914 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 238 IPR036638 GO:0046983
Alju01g1914 313 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1914 Alju-ChrAlju01 15720570 15723136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1914 171 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 37.121 3.78e-20 87.8