Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1910 ATGGCGACCACATGCTCGAAAAAAAGGAAGAGAATTGGTGATGGAGTTTCACTCTTGGACTCCAACAAGAGAAAAGAAACCTTGTTCAGAAAATGTCACGAGCTTGCGGTGAAGAGCGGCGCTGAGGTTAGTTTGGTGTGTATTGGGCCTGACGGAGAAATTGAGGCATGGCCCAATCATGGGAAAGTGAAGGCCATGCTCATTAAGCACAGAGAGAAGCAAGCTGGGAAGAAGAAGAACAATGACGAGTTCTCACTCGAGTCCGAATTGGAGGAGGAGGAGAAGAAGAAGAAGAAATCAGCGAACGATTCGCCTGGGAAGCTTTCTGCAGAGTCAATGATGACTCTGTTAACGGAAATTGATTCGAAGCTAGAAACCCTAGATGAGAAAATCAAGATGCTGAGTATCCAAAAAGCCACTGATTTTTGTGATAGTCTGAATAATTCCGGGGATTTCATGGAGATTTATGATTGGCATGATCTGTCAACAAACAAGATAGAATCGTACGGCCAACCACTAGTTTGTTCTGTACAATTAAATCAACCAATGGTTGTTTCTGCTGATGAAGATGATTCGTTTGTTAGCAACATGGGCAACCAGAGTGGGTGGGATTCTCAGAATACTGAGAGTTTTGCGCTGAACCAAACTTGGGAGCCAGAAATAGAATTGCTTGGGTCACAAGAATGGACGAGATGA 696 0.4397 MATTCSKKRKRIGDGVSLLDSNKRKETLFRKCHELAVKSGAEVSLVCIGPDGEIEAWPNHGKVKAMLIKHREKQAGKKKNNDEFSLESELEEEEKKKKKSANDSPGKLSAESMMTLLTEIDSKLETLDEKIKMLSIQKATDFCDSLNNSGDFMEIYDWHDLSTNKIESYGQPLVCSVQLNQPMVVSADEDDSFVSNMGNQSGWDSQNTESFALNQTWEPEIELLGSQEWTR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1910 231 Coils Coil 117 137 - -
Alju01g1910 231 SUPERFAMILY SRF-like 22 73 IPR036879 GO:0003677|GO:0046983
Alju01g1910 231 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 22 57 IPR002100 GO:0003677|GO:0046983
Alju01g1910 231 MobiDBLite consensus disorder prediction 72 110 - -
Alju01g1910 231 MobiDBLite consensus disorder prediction 75 104 - -
Alju01g1910 231 Gene3D - 22 102 IPR036879 GO:0003677|GO:0046983
Alju01g1910 231 ProSiteProfiles MADS-box domain profile. 22 61 IPR002100 GO:0003677|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1910 24 138 MADS-box Gene Family AT5G65330 30.508 1.04e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Alju01g1910 SRF-TF 1.4e-08 No_clan